RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	YPT52	P36018	234 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	POP2	P39008	433 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YRB1	P41920	201 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	FOL2	P51601	243 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	COS6	P53344	381 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	BCH1	Q05029	724 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	BDS1	Q08347	646 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SFM1	Q12314	213 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	ERG20	P08524	352 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	MET8	P15807	274 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	MF(ALPHA)2	P32435	120 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YKR015C	P36111	568 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YHL012W	P38709	493 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YAT2	P40017	923 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	IDS2	P46958	469 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YJR098C	P47139	656 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	NHX1	Q04121	633 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	BUD22	Q04347	519 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	BOP2	Q06150	570 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SGT1	Q08446	395 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YDR524C-B	Q3E6R4	66 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	PDC5	P16467	563 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	SLY41	P22215	453 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SCJ1	P25303	377 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	CDC20	P26309	610 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SEC66	P33754	206 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	CUE2	P36075	443 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	MRP21	P38175	177 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	AMN1	P38285	549 aa	Predicted RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	SOH1	P38633	127 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	ATM1	P40416	690 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YIL001W	P40560	513 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SNZ1	Q03148	297 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YDR476C	Q03362	224 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	TVP15	Q03860	143 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	RCO1	Q04779	684 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	MSC3	Q05812	728 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YPQ2	Q06328	317 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	CRN1	Q06440	651 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	AFI1	Q99222	893 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	SEC14	P24280	304 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	RPS5	P26783	225 aa	Known RBP	4.58	□□□□□ -1.68
PDR15	YDR406W	DGR2	P32330	852 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	MDL1	P33310	695 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YBR032W	P38223	100 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	TRM5	P38793	499 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	TVP23	P38962	199 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	ALG5	P40350	334 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	YJR061W	P40355	935 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	PRK1	P40494	810 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	LSB6	P42951	607 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	IMA1	P53051	589 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	GCN5	Q03330	439 aa		4.58	□□□□□ -1.68
PDR15	YDR406W	PRP2	P20095	876 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	DAL81	P21657	970 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	OCA4	P25366	362 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	MLS1	P30952	554 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	DAD2	P36162	133 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	RFS1	P38234	210 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	DED81	P38707	554 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	YIL077C	P40508	320 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	RRN7	P40992	514 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	MET12	P46151	657 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	YNL140C	P53910	189 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	ADE12	P80210	433 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	HSH49	Q99181	213 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	RPL24A	P04449	155 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	NSP1	P14907	823 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	ATP12	P22135	325 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	ADK2	P26364	225 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	PET127	P32606	800 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	NTR2	P36118	322 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	YCR087C-A	P37263	153 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	YHR182W	P38870	785 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	JHD1	P40034	492 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	USE1	P53146	245 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	CUS2	P53830	285 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	TMA20	P89886	181 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	ECM22	Q05958	814 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	ABF1	P14164	731 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	AMD2	P22580	549 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PDR15	YDR406W	HOG1	P32485	435 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	UTR2	P32623	467 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	DOM34	P33309	386 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	MAC1	P35192	417 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	YBR056W	P38081	501 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	SEC31	P38968	1273 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	NUP60	P39705	539 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	EDC3	P39998	551 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	PFK26	P40433	827 aa	Known RBP	4.57	□□□□□ -1.68
PDR15	YDR406W	NAS2	P40555	220 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	MAF1	P41910	395 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	MAD3	P47074	515 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	COG2	P53271	262 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	YNR065C	P53751	1116 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	SLT2	Q00772	484 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	CSN9	Q03981	162 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	AIM32	Q04689	311 aa		4.57	□□□□□ -1.68
PDR15	YDR406W	MCP2	Q06567	569 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms