RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	PPQ1	P32945	549 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	TAF14	P35189	244 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	JEN1	P36035	616 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	AHP1	P38013	176 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	ARA1	P38115	344 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ECM31	P38122	312 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	GIC1	P38785	314 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PMC1	P38929	1173 aa	Predicted RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	RPT2	P40327	437 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YFL066C	P43538	392 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ZAP1	P47043	880 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	AZR1	P50080	613 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	KXD1	P53158	218 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YGR127W	P53275	312 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SPC98	P53540	846 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	CAF40	P53829	373 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ECM9	Q02202	377 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YMR010W	Q03687	405 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PPN1	Q04119	674 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	TAF11	Q04226	346 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	TRM12	Q04235	462 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YDL129W	Q07555	291 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	CRD1	Q07560	283 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	WHI4	Q07655	649 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	COS7	Q07788	383 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	GAS5	Q08193	484 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	IMA2	Q08295	589 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YOR131C	Q12486	218 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	AI5_BETA	Q9ZZX0	354 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ATP6	P00854	259 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	RPS17A	P02407	136 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	RPS31	P05759	152 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	RPS17B	P14127	136 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	CDC34	P14682	295 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	STF2	P16965	84 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PEX1	P24004	1043 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SRB2	P34162	210 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	LRG1	P35688	1017 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	MCM7	P38132	845 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	IST2	P38250	946 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	THO1	P40040	218 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	SER3	P40054	469 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YTA6	P40328	754 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SAP4	P53036	818 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	RCF2	P53721	224 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	IPI3	P53877	555 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SPR6	Q01684	191 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SPP1	Q03012	353 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	RPN9	Q04062	393 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YLL007C	Q07799	665 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ACF2	Q12168	779 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	RBD2	Q12270	262 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YLR126C	Q12288	251 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YPL247C	Q12523	523 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	LSO2	Q3E772	92 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	GAL10	P04397	699 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
UPC2	YDR213W	GLN4	P13188	809 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	AMS1	P22855	1083 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PRE9	P23638	258 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	ATG22	P25568	528 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	HRR25	P29295	494 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	AEP1	P32493	518 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PET309	P32522	965 aa	Predicted RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	MRS6	P32864	603 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	ECM8	P38246	354 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ARN1	P38731	627 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	CRP1	P38845	465 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YAP1801	P38856	637 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	NMD3	P38861	518 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	ATG7	P38862	630 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PHM8	P40025	321 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	DOT6	P40059	670 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	GID8	P40208	455 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SNZ3	P43545	298 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	CAF16	P43569	289 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	GLG2	P47011	380 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	CCT8	P47079	568 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YJR154W	P47181	346 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	BUD32	P53323	261 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	SNZ2	P53824	298 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YNL095C	P53932	642 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	VAC7	P53950	1165 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	ERV25	P54837	211 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	LSM3	P57743	89 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YML131W	Q03102	365 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	BCH1	Q05029	724 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	CRN1	Q06440	651 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	GPI11	Q06636	219 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	YNG1	Q08465	219 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	PFK27	Q12471	397 aa	Predicted RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	HMG1	P12683	1054 aa		4.22	□□□□□ -1.73
UPC2	YDR213W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
UPC2	YDR213W	PEX34	P25584	144 aa		4.22	□□□□□ -1.73
UPC2	YDR213W	GAC1	P28006	793 aa		4.22	□□□□□ -1.73
UPC2	YDR213W	ERG9	P29704	444 aa		4.22	□□□□□ -1.73
UPC2	YDR213W	YKL077W	P36081	392 aa		4.22	□□□□□ -1.73
UPC2	YDR213W	YBR259W	P38338	688 aa		4.22	□□□□□ -1.73
UPC2	YDR213W	SRP72	P38688	640 aa	Known RBP	4.22	□□□□□ -1.73
UPC2	YDR213W	YHR131C	P38835	850 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms