RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC5, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC5	YDR059C	PEP5	P12868	1029 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	PUT3	P25502	979 aa	Predicted RBP	3.56	□□□□□ -1.84
UBC5	YDR059C	HXT1	P32465	570 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	PTH1	P38876	190 aa	Known RBP	3.56	□□□□□ -1.84
UBC5	YDR059C	ALG8	P40351	577 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	BNA1	P47096	177 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	WSC2	P53832	503 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	DUG3	P53871	357 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	SHR3	Q02774	210 aa		3.56	□□□□□ -1.84
UBC5	YDR059C	PAL1	Q05518	499 aa	Known RBP	3.56	□□□□□ -1.84
UBC5	YDR059C	RRP12	Q12754	1228 aa	Known RBP	3.56	□□□□□ -1.84
UBC5	YDR059C	SNF1	P06782	633 aa	Known RBP	3.55	□□□□□ -1.84
UBC5	YDR059C	VMA16	P23968	213 aa		3.55	□□□□□ -1.84
UBC5	YDR059C	KTR3	P38130	404 aa	Predicted RBP	3.55	□□□□□ -1.84
UBC5	YDR059C	FMP10	P40098	244 aa		3.55	□□□□□ -1.84
UBC5	YDR059C	AAD10	P47182	288 aa		3.55	□□□□□ -1.84
UBC5	YDR059C	SDT1	P53078	280 aa		3.55	□□□□□ -1.84
UBC5	YDR059C	VID22	Q05934	901 aa		3.55	□□□□□ -1.84
UBC5	YDR059C	SPT15	P13393	240 aa	Known RBP	3.54	□□□□□ -1.84
UBC5	YDR059C	RNA14	P25298	677 aa	Known RBP	3.54	□□□□□ -1.84
UBC5	YDR059C	DBF20	P32328	564 aa		3.54	□□□□□ -1.84
UBC5	YDR059C	YKL023W	P36103	277 aa	Known RBP	3.54	□□□□□ -1.84
UBC5	YDR059C	MRPL51	Q06090	140 aa	Predicted RBP	3.54	□□□□□ -1.84
UBC5	YDR059C	CTF3	Q12748	733 aa		3.54	□□□□□ -1.84
UBC5	YDR059C	FUN19	P28003	413 aa	Predicted RBP	3.53	□□□□□ -1.84
UBC5	YDR059C	RFS1	P38234	210 aa	Known RBP	3.53	□□□□□ -1.84
UBC5	YDR059C	SLX1	P38324	304 aa		3.53	□□□□□ -1.84
UBC5	YDR059C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
UBC5	YDR059C	SNG1	P46950	547 aa		3.53	□□□□□ -1.84
UBC5	YDR059C	DPB4	Q04603	196 aa	Known RBP	3.53	□□□□□ -1.84
UBC5	YDR059C	YOR387C	Q08910	206 aa		3.53	□□□□□ -1.84
UBC5	YDR059C	LPD1	P09624	499 aa	Known RBP	3.52	□□□□□ -1.85
UBC5	YDR059C	SGF29	P25554	259 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	SYN8	P31377	255 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	CBF2	P32504	956 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	FRE1	P32791	686 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	YME1	P32795	747 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	SRO77	P38163	1010 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	YJR154W	P47181	346 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	YGL039W	P53183	348 aa	Known RBP	3.52	□□□□□ -1.85
UBC5	YDR059C	BUD32	P53323	261 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	VPS74	Q06385	345 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	NBP2	Q12163	236 aa		3.52	□□□□□ -1.85
UBC5	YDR059C	YCR007C	P25354	239 aa		3.51	□□□□□ -1.85
UBC5	YDR059C	DEG1	P31115	442 aa	Known RBP	3.51	□□□□□ -1.85
UBC5	YDR059C	YBL055C	P34220	418 aa	Predicted RBP	3.51	□□□□□ -1.85
UBC5	YDR059C	NUP133	P36161	1157 aa		3.51	□□□□□ -1.85
UBC5	YDR059C	HAT2	P39984	401 aa		3.51	□□□□□ -1.85
UBC5	YDR059C	PTR3	P43606	678 aa		3.51	□□□□□ -1.85
UBC5	YDR059C	YGR127W	P53275	312 aa		3.51	□□□□□ -1.85
UBC5	YDR059C	SLD5	Q03406	294 aa		3.51	□□□□□ -1.85
UBC5	YDR059C	RIX7	Q07844	837 aa	Known RBP	3.51	□□□□□ -1.85
UBC5	YDR059C	BOS1	P25385	244 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	PUP3	P25451	205 aa	Known RBP	3.5	□□□□□ -1.85
UBC5	YDR059C	NAM9	P27929	486 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	YIM1	P28625	365 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	PSY4	P38193	441 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	SAP185	P40856	1058 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	YGR210C	P42942	411 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	FAR3	P46671	204 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	EFM6	P53970	246 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	MSC1	Q03104	513 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	MHR1	Q06630	226 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	TMC1	Q08422	150 aa	Predicted RBP	3.5	□□□□□ -1.85
UBC5	YDR059C	YOL087C	Q99247	1116 aa		3.5	□□□□□ -1.85
UBC5	YDR059C	SSM4	P40318	1319 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	SUP35	P05453	685 aa	Known RBP	3.49	□□□□□ -1.85
UBC5	YDR059C	SPR1	P32603	445 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	MSN2	P33748	704 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	YBL059W	P34224	193 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	YER010C	P40011	234 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	IRC15	Q02733	499 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	NCE102	Q12207	173 aa	RIP-Chip data	3.49	□□□□□ -1.85	not detected
UBC5	YDR059C	LSP1	Q12230	341 aa	Known RBP	3.49	□□□□□ -1.85
UBC5	YDR059C	ERV2	Q12284	196 aa		3.49	□□□□□ -1.85
UBC5	YDR059C	CPR1	P14832	162 aa	Known RBP	3.48	□□□□□ -1.85
UBC5	YDR059C	SUI2	P20459	304 aa	Known RBP	3.48	□□□□□ -1.85
UBC5	YDR059C	ISY1	P21374	235 aa	Predicted RBP	3.48	□□□□□ -1.85
UBC5	YDR059C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
UBC5	YDR059C	PTH2	P34222	208 aa		3.48	□□□□□ -1.85
UBC5	YDR059C	DSD1	P53095	428 aa		3.48	□□□□□ -1.85
UBC5	YDR059C	YGR126W	P53274	230 aa		3.48	□□□□□ -1.85
UBC5	YDR059C	IVY1	Q04934	453 aa		3.48	□□□□□ -1.85
UBC5	YDR059C	YOR365C	Q08844	703 aa		3.48	□□□□□ -1.85
UBC5	YDR059C	SOD1	P00445	154 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	KGD1	P20967	1014 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	LSB5	P25369	354 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	RPL32	P38061	130 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	ICS2	P38284	255 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	NDT80	P38830	627 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	YHR210C	P38893	341 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	APT1	P49435	187 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	DRN1	P53255	507 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	ELP3	Q02908	557 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	RRN11	Q04712	507 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	SNO4	Q04902	237 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	HSP33	Q08914	237 aa	Known RBP	3.47	□□□□□ -1.85
UBC5	YDR059C	TCO89	Q08921	799 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	HSP32	Q08992	237 aa		3.47	□□□□□ -1.85
UBC5	YDR059C	SUC2	P00724	532 aa		3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms