RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W SPC105P53148 917 aa12.1□□□□□ -0.47
PTP1YDL230W RAD33Q04231 177 aa12.1□□□□□ -0.47
PTP1YDL230W YDR124WQ04608 324 aa12.1□□□□□ -0.47
PTP1YDL230W ERG6P25087 383 aaKnown RBP12.09□□□□□ -0.47
PTP1YDL230W OCA4P25366 362 aa12.09□□□□□ -0.47
PTP1YDL230W TIP20P33891 701 aa12.09□□□□□ -0.47
PTP1YDL230W UBP14P38237 781 aaKnown RBP12.09□□□□□ -0.47
PTP1YDL230W DSS1P39112 969 aa12.09□□□□□ -0.47
PTP1YDL230W HEM14P40012 539 aa12.09□□□□□ -0.47
PTP1YDL230W MEP2P41948 499 aa12.09□□□□□ -0.47
PTP1YDL230W VEL1P53058 206 aa12.09□□□□□ -0.47
PTP1YDL230W RMR1P53060 241 aa12.09□□□□□ -0.47
PTP1YDL230W YHC1Q05900 231 aaKnown RBP12.09□□□□□ -0.47
PTP1YDL230W VTA1Q06263 330 aa12.09□□□□□ -0.47
PTP1YDL230W RSC3Q06639 885 aa12.09□□□□□ -0.47
PTP1YDL230W RAD34Q06665 692 aa12.09□□□□□ -0.47
PTP1YDL230W RSB1Q08417 382 aa12.09□□□□□ -0.47
PTP1YDL230W GET4Q12125 312 aa12.09□□□□□ -0.47
PTP1YDL230W PER33Q12144 273 aa12.09□□□□□ -0.47
PTP1YDL230W THP2O13539 261 aaKnown RBP12.08□□□□□ -0.48
PTP1YDL230W HTA2P04912 132 aa12.08□□□□□ -0.48
PTP1YDL230W HMG2P12684 1045 aa12.08□□□□□ -0.48
PTP1YDL230W YAP1P19880 650 aaKnown RBP12.08□□□□□ -0.48
PTP1YDL230W TYE7P33122 291 aaPredicted RBP12.08□□□□□ -0.48
PTP1YDL230W WHI3P34761 661 aaKnown RBP12.08□□□□□ -0.48
PTP1YDL230W SPC42P36094 363 aa12.08□□□□□ -0.48
PTP1YDL230W FTH1P38310 465 aa12.08□□□□□ -0.48
PTP1YDL230W PCL5P38794 229 aa12.08□□□□□ -0.48
PTP1YDL230W VHR1P40522 640 aa12.08□□□□□ -0.48
PTP1YDL230W YGL176CP46945 554 aa12.08□□□□□ -0.48
PTP1YDL230W GTO1P48239 356 aa12.08□□□□□ -0.48
PTP1YDL230W KEL2P50090 882 aa12.08□□□□□ -0.48
PTP1YDL230W PST1Q12355 444 aa12.08□□□□□ -0.48
PTP1YDL230W MDJ1P35191 511 aa12.07□□□□□ -0.48
PTP1YDL230W YHR218WP38899 603 aa12.07□□□□□ -0.48
PTP1YDL230W PRM1P53835 661 aa12.07□□□□□ -0.48
PTP1YDL230W YMR010WQ03687 405 aa12.07□□□□□ -0.48
PTP1YDL230W REH1Q06709 432 aa12.07□□□□□ -0.48
PTP1YDL230W NTO1Q12311 748 aa12.07□□□□□ -0.48
PTP1YDL230W YOR338WQ99326 363 aa12.07□□□□□ -0.48
PTP1YDL230W SIR1P21691 654 aa12.06□□□□□ -0.48
PTP1YDL230W URE2P23202 354 aaKnown RBP12.06□□□□□ -0.48
PTP1YDL230W PTP2P29461 750 aa12.06□□□□□ -0.48
PTP1YDL230W SYN8P31377 255 aa12.06□□□□□ -0.48
PTP1YDL230W VPH2P32341 215 aa12.06□□□□□ -0.48
PTP1YDL230W BCK2P33306 851 aa12.06□□□□□ -0.48
PTP1YDL230W TIF3P34167 436 aaKnown RBP12.06□□□□□ -0.48
PTP1YDL230W DUN1P39009 513 aa12.06□□□□□ -0.48
PTP1YDL230W ATG17Q06410 417 aa12.06□□□□□ -0.48
PTP1YDL230W IOC2Q12072 812 aa12.06□□□□□ -0.48
PTP1YDL230W YAR066WP0CX18 203 aa12.05□□□□□ -0.48
PTP1YDL230W YHR214WP0CX19 203 aa12.05□□□□□ -0.48
PTP1YDL230W RPS4AP0CX35 261 aaKnown RBP12.05□□□□□ -0.48
PTP1YDL230W RPS4BP0CX36 261 aaKnown RBP12.05□□□□□ -0.48
PTP1YDL230W TOP3P13099 656 aa12.05□□□□□ -0.48
PTP1YDL230W TAL1P15019 335 aaKnown RBP12.05□□□□□ -0.48
PTP1YDL230W BRF1P29056 596 aa12.05□□□□□ -0.48
PTP1YDL230W SPS19P32573 292 aaKnown RBP12.05□□□□□ -0.48
PTP1YDL230W YHR020WP38708 688 aaKnown RBP12.05□□□□□ -0.48
PTP1YDL230W SWD1P39706 426 aa12.05□□□□□ -0.48
PTP1YDL230W RGI1P40043 161 aaPredicted RBP12.05□□□□□ -0.48
PTP1YDL230W EMP65P40085 556 aa12.05□□□□□ -0.48
PTP1YDL230W AYR1P40471 297 aa12.05□□□□□ -0.48
PTP1YDL230W ELP2P42935 788 aa12.05□□□□□ -0.48
PTP1YDL230W AGP3P43548 558 aa12.05□□□□□ -0.48
PTP1YDL230W GLG2P47011 380 aa12.05□□□□□ -0.48
PTP1YDL230W HST3P53687 447 aa12.05□□□□□ -0.48
PTP1YDL230W YNL095CP53932 642 aa12.05□□□□□ -0.48
PTP1YDL230W MMT1Q03218 510 aa12.05□□□□□ -0.48
PTP1YDL230W YMR226CQ05016 267 aaKnown RBP12.05□□□□□ -0.48
PTP1YDL230W LOT6Q07923 191 aa12.05□□□□□ -0.48
PTP1YDL230W BUD7Q08754 746 aa12.05□□□□□ -0.48
PTP1YDL230W RHO1P06780 209 aaKnown RBP12.04□□□□□ -0.48
PTP1YDL230W COR1P07256 457 aa12.04□□□□□ -0.48
PTP1YDL230W REV1P12689 985 aa12.04□□□□□ -0.48
PTP1YDL230W SEC63P14906 663 aa12.04□□□□□ -0.48
PTP1YDL230W APA1P16550 321 aaKnown RBP12.04□□□□□ -0.48
PTP1YDL230W UBA1P22515 1024 aaKnown RBP12.04□□□□□ -0.48
PTP1YDL230W PUP3P25451 205 aaKnown RBP12.04□□□□□ -0.48
PTP1YDL230W CBF5P33322 483 aaKnown RBP RIP-Chip data12.04□□□□□ -0.48not detected
PTP1YDL230W YBR241CP38142 488 aa12.04□□□□□ -0.48
PTP1YDL230W MTW1P39731 289 aa12.04□□□□□ -0.48
PTP1YDL230W RPH1P39956 796 aa12.04□□□□□ -0.48
PTP1YDL230W MEP1P40260 492 aa12.04□□□□□ -0.48
PTP1YDL230W UTP18P40362 594 aaPredicted RBP12.04□□□□□ -0.48
PTP1YDL230W CIA1Q05583 330 aa12.04□□□□□ -0.48
PTP1YDL230W GPI11Q06636 219 aa12.04□□□□□ -0.48
PTP1YDL230W NSE1Q07913 336 aa12.04□□□□□ -0.48
PTP1YDL230W SMF3Q12078 473 aaPredicted RBP12.04□□□□□ -0.48
PTP1YDL230W VPS13Q07878 3144 aa12.04□□□□□ -0.48
PTP1YDL230W SEM1O94742 89 aa12.03□□□□□ -0.48
PTP1YDL230W RAS2P01120 322 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W IDI1P15496 288 aa12.03□□□□□ -0.48
PTP1YDL230W RPL5P26321 297 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W CRM1P30822 1084 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W ZUO1P32527 433 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W YKL100CP34248 587 aa12.03□□□□□ -0.48
PTP1YDL230W LRP1P38801 184 aaKnown RBP12.03□□□□□ -0.48
PTP1YDL230W PEX28P38848 579 aa12.03□□□□□ -0.48
PTP1YDL230W SSN3P39073 555 aa12.03□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms