RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YNL144C	P53907	740 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	ARX1	Q03862	593 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	GYL1	Q04322	720 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	ARP10	Q04549	284 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	PFA4	Q12006	378 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	RRI1	Q12468	440 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	RPL31B	P0C2H9	113 aa	Known RBP	5.49	□□□□□ -1.53
RPN5	YDL147W	CPR2	P23285	205 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	HXT3	P32466	567 aa	Known RBP	5.49	□□□□□ -1.53
RPN5	YDL147W	NTC20	P38302	140 aa	Predicted RBP	5.49	□□□□□ -1.53
RPN5	YDL147W	APE4	P38821	490 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	NMD5	P46970	1048 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	IDP3	P53982	420 aa	Known RBP	5.49	□□□□□ -1.53
RPN5	YDL147W	YVH1	Q02256	364 aa	Known RBP	5.49	□□□□□ -1.53
RPN5	YDL147W	MSC1	Q03104	513 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	DON1	Q05610	365 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	COQ9	Q05779	260 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	MCP2	Q06567	569 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	OSW1	Q08692	278 aa		5.49	□□□□□ -1.53
RPN5	YDL147W	SRV2	P17555	526 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	RAD14	P28519	371 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	VPH1	P32563	840 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	MDL1	P33310	695 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	SHP1	P34223	423 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	TUL1	P36096	758 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	YKL023W	P36103	277 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	UBA4	P38820	440 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	YJL055W	P47044	245 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	VPS25	P47142	202 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	RBS1	Q05672	457 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	ADE13	Q05911	482 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	FMP45	Q07651	309 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	not detected
RPN5	YDL147W	BRR1	Q99177	341 aa	Predicted RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	BNR1	P40450	1375 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	APE1	P14904	514 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	PRP2	P20095	876 aa	Predicted RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	CNA1	P23287	553 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	PPH22	P23595	377 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	BUD14	P27637	709 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	ERV1	P27882	189 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	RML2	P32611	393 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	YME2	P32843	850 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	VPS41	P38959	992 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	YIL060W	P40519	144 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	CAK1	P43568	368 aa	Predicted RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	SNG1	P46950	547 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	FMS1	P50264	508 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	YGL138C	P53122	345 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	EAF7	P53911	425 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	OAZ1	Q02803	292 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	SOV1	Q04748	898 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	RRP45	Q05636	305 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	POS5	Q06892	414 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	RDR1	Q08904	546 aa		5.48	□□□□□ -1.53
RPN5	YDL147W	PDH1	Q12428	516 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	PAR32	Q12515	295 aa	Known RBP	5.48	□□□□□ -1.53
RPN5	YDL147W	SPS4	P09937	338 aa		5.47	□□□□□ -1.53
RPN5	YDL147W	AFG1	P32317	509 aa		5.47	□□□□□ -1.53
RPN5	YDL147W	ECM32	P32644	1121 aa	Known RBP	5.47	□□□□□ -1.53
RPN5	YDL147W	ATG27	P46989	271 aa		5.47	□□□□□ -1.53
RPN5	YDL147W	NET1	P47035	1189 aa		5.47	□□□□□ -1.53
RPN5	YDL147W	ERG13	P54839	491 aa	Known RBP	5.47	□□□□□ -1.53
RPN5	YDL147W	YMR160W	Q03823	816 aa		5.47	□□□□□ -1.53
RPN5	YDL147W	THP1	Q08231	455 aa		5.47	□□□□□ -1.53
RPN5	YDL147W	YMR085W	P0CF18	432 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	ELO2	P25358	347 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	NIP100	P33420	868 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	MBB1	P39534	108 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	LCB2	P40970	561 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	URB2	P47108	1174 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	PYK2	P52489	506 aa	Known RBP	5.46	□□□□□ -1.54
RPN5	YDL147W	SMM1	P53720	384 aa	Known RBP	5.46	□□□□□ -1.54
RPN5	YDL147W	SHR3	Q02774	210 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	YDL218W	Q07629	317 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	FRE7	Q12333	620 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	CTF3	Q12748	733 aa		5.46	□□□□□ -1.54
RPN5	YDL147W	SPT7	P35177	1332 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	RHO2	P06781	192 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	COR1	P07256	457 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	SPB1	P25582	841 aa	Predicted RBP	5.45	□□□□□ -1.54
RPN5	YDL147W	IDH2	P28241	369 aa	Known RBP	5.45	□□□□□ -1.54
RPN5	YDL147W	FLO10	P36170	1169 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	SCO2	P38072	301 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	RXT2	P38255	430 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	ARP1	P38696	384 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	ULP2	P40537	1034 aa	Predicted RBP	5.45	□□□□□ -1.54
RPN5	YDL147W	AIM22	P47051	409 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	TCB2	P48231	1178 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	YGR149W	P48236	432 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	YNL234W	P53857	426 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	RSC9	Q03124	581 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	HOT1	Q03213	719 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	CTL1	Q03220	320 aa	Known RBP	5.45	□□□□□ -1.54
RPN5	YDL147W	TAP42	Q04372	366 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	ISN1	Q99312	450 aa		5.45	□□□□□ -1.54
RPN5	YDL147W	RAV1	P47104	1357 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	CBP1	P07252	654 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	PEP4	P07267	405 aa	Known RBP	5.44	□□□□□ -1.54
RPN5	YDL147W	PEP5	P12868	1029 aa		5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms