RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W NPR3P38742 1146 aa2.18□□□□□ -2.06
UBP1YDL122W SSU1P41930 458 aa2.18□□□□□ -2.06
UBP1YDL122W HFM1P51979 1187 aa2.18□□□□□ -2.06
UBP1YDL122W ZIP2P53061 704 aa2.18□□□□□ -2.06
UBP1YDL122W PIR1Q03178 341 aa2.18□□□□□ -2.06
UBP1YDL122W EIS1Q05050 843 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W GRC3Q07845 632 aa2.18□□□□□ -2.06
UBP1YDL122W DCS2Q12123 353 aa2.18□□□□□ -2.06
UBP1YDL122W GIS3Q12418 502 aa2.18□□□□□ -2.06
UBP1YDL122W YLR149CQ99296 730 aa2.18□□□□□ -2.06
UBP1YDL122W GAL10P04397 699 aa2.18□□□□□ -2.06
UBP1YDL122W PRP6P19735 899 aaPredicted RBP2.18□□□□□ -2.06
UBP1YDL122W SAN1P22470 610 aa2.18□□□□□ -2.06
UBP1YDL122W GID7P25569 745 aa2.18□□□□□ -2.06
UBP1YDL122W LRE1P25579 583 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W GEX1P25596 615 aa2.18□□□□□ -2.06
UBP1YDL122W GEX2P36173 615 aa2.18□□□□□ -2.06
UBP1YDL122W NOP4P37838 685 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W SRP72P38688 640 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W STL1P39932 569 aa2.18□□□□□ -2.06
UBP1YDL122W MKT1P40850 830 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W ZIM17P42844 174 aa2.18□□□□□ -2.06
UBP1YDL122W MNT2P53059 558 aa2.18□□□□□ -2.06
UBP1YDL122W PUS2P53167 370 aa2.18□□□□□ -2.06
UBP1YDL122W PRO2P54885 456 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W MRPL13Q02204 264 aa2.18□□□□□ -2.06
UBP1YDL122W SXM1Q04175 944 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W NGL1Q08213 363 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W RSA1Q08932 381 aa2.18□□□□□ -2.06
UBP1YDL122W YPR089WO13585 888 aa2.17□□□□□ -2.06
UBP1YDL122W GLN4P13188 809 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W EFB1P32471 206 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W RPS0AP32905 252 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W THI80P35202 319 aa2.17□□□□□ -2.06
UBP1YDL122W NUP120P35729 1037 aa2.17□□□□□ -2.06
UBP1YDL122W SRP68P38687 599 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W GND1P38720 489 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W SCS2P40075 244 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W PCI8P40512 444 aa2.17□□□□□ -2.06
UBP1YDL122W YJR039WP47107 1121 aa2.17□□□□□ -2.06
UBP1YDL122W SWC4P53201 476 aa2.17□□□□□ -2.06
UBP1YDL122W ARC35P53731 342 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W YKR011CQ02209 353 aa2.17□□□□□ -2.06
UBP1YDL122W ARG7Q04728 441 aa2.17□□□□□ -2.06
UBP1YDL122W DON1Q05610 365 aa2.17□□□□□ -2.06
UBP1YDL122W YPR114WQ06107 315 aa2.17□□□□□ -2.06
UBP1YDL122W YDL073WQ07454 984 aa2.17□□□□□ -2.06
UBP1YDL122W TPO1Q07824 586 aa2.17□□□□□ -2.06
UBP1YDL122W RSC58Q07979 502 aa2.17□□□□□ -2.06
UBP1YDL122W MCH5Q08777 521 aa2.17□□□□□ -2.06
UBP1YDL122W THI21Q08975 551 aa2.17□□□□□ -2.06
UBP1YDL122W SPO24Q3E752 67 aa2.17□□□□□ -2.06
UBP1YDL122W LAG2Q92325 660 aa2.17□□□□□ -2.06
UBP1YDL122W SAM35P14693 329 aa2.17□□□□□ -2.06
UBP1YDL122W RDS1P25611 832 aa2.17□□□□□ -2.06
UBP1YDL122W DGR2P32330 852 aa2.17□□□□□ -2.06
UBP1YDL122W HXT4P32467 576 aa2.17□□□□□ -2.06
UBP1YDL122W NTR2P36118 322 aaPredicted RBP2.17□□□□□ -2.06
UBP1YDL122W YBR062CP38239 180 aa2.17□□□□□ -2.06
UBP1YDL122W MMS21P38632 267 aa2.17□□□□□ -2.06
UBP1YDL122W DED81P38707 554 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W BCD1P38772 366 aa2.17□□□□□ -2.06
UBP1YDL122W SSZ1P38788 538 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W PTC7P38797 343 aa2.17□□□□□ -2.06
UBP1YDL122W SPC72P39723 622 aa2.17□□□□□ -2.06
UBP1YDL122W NOP16P40007 231 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W SLZ1P40167 298 aa2.17□□□□□ -2.06
UBP1YDL122W LRO1P40345 661 aa2.17□□□□□ -2.06
UBP1YDL122W YIL086CP40503 102 aa2.17□□□□□ -2.06
UBP1YDL122W ULP2P40537 1034 aaPredicted RBP2.17□□□□□ -2.06
UBP1YDL122W GLG2P47011 380 aa2.17□□□□□ -2.06
UBP1YDL122W MAD3P47074 515 aa2.17□□□□□ -2.06
UBP1YDL122W PUS4P48567 403 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W OCA1P50946 238 aaPredicted RBP2.17□□□□□ -2.06
UBP1YDL122W NBP35P52920 328 aa2.17□□□□□ -2.06
UBP1YDL122W YNL143CP53908 130 aa2.17□□□□□ -2.06
UBP1YDL122W NOP15P53927 220 aaPredicted RBP2.17□□□□□ -2.06
UBP1YDL122W YNL040WP53960 456 aaPredicted RBP2.17□□□□□ -2.06
UBP1YDL122W GSF2Q04697 403 aaKnown RBP2.17□□□□□ -2.06
UBP1YDL122W SIL1Q08199 421 aa2.17□□□□□ -2.06
UBP1YDL122W DYN1P36022 4092 aa2.16□□□□□ -2.06
UBP1YDL122W TRA1P38811 3744 aa2.16□□□□□ -2.06
UBP1YDL122W MIS1P09440 975 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W TUB3P09734 445 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W AAC3P18238 307 aa2.16□□□□□ -2.06
UBP1YDL122W PEX5P35056 612 aa2.16□□□□□ -2.06
UBP1YDL122W YHL012WP38709 493 aa2.16□□□□□ -2.06
UBP1YDL122W PIH1P38768 344 aa2.16□□□□□ -2.06
UBP1YDL122W SPT8P38915 602 aa2.16□□□□□ -2.06
UBP1YDL122W SWD1P39706 426 aa2.16□□□□□ -2.06
UBP1YDL122W YEL068CP39977 110 aa2.16□□□□□ -2.06
UBP1YDL122W IRC5P43610 853 aa2.16□□□□□ -2.06
UBP1YDL122W HSH155P49955 971 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W SAP4P53036 818 aa2.16□□□□□ -2.06
UBP1YDL122W RAI1P53063 387 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W RBG2P53295 368 aaKnown RBP2.16□□□□□ -2.06
UBP1YDL122W YLR407WQ06070 228 aa2.16□□□□□ -2.06
UBP1YDL122W YLR352WQ06479 807 aa2.16□□□□□ -2.06
UBP1YDL122W HAL9Q12180 1030 aa2.16□□□□□ -2.06
UBP1YDL122W PHO5P00635 467 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms