RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	GIS4	Q04233	774 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	GLO2	Q05584	274 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	COA4	Q05809	96 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	STE23	Q06010	1027 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	VTA1	Q06263	330 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	DIA2	Q08496	732 aa	Predicted RBP	5.74	□□□□□ -1.49
SUB2	YDL084W	ULA1	Q12059	462 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	YOL107W	Q12239	342 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	INP53	Q12271	1107 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	DCN1	Q12395	269 aa		5.74	□□□□□ -1.49
SUB2	YDL084W	GEA1	P47102	1408 aa	Predicted RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	YLR278C	Q05854	1341 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	SIR4	P11978	1358 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	QCR2	P07257	368 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	MET2	P08465	486 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	GFA1	P14742	717 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	SNF6	P18888	332 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	DBR1	P24309	405 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	PDB1	P32473	366 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	MRT4	P33201	236 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	ANR2	P36090	516 aa	Predicted RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	MCX1	P38323	520 aa	Predicted RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	TAE1	P38340	232 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	KSP1	P38691	1029 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	RFC4	P40339	323 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	NTA1	P40354	457 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	VMA13	P41807	478 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	FAR7	P43592	221 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	IDS2	P46958	469 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	FAA4	P47912	694 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	AMA1	P50082	593 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	YGL159W	P53110	370 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	TIM21	P53220	239 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	SHY1	P53266	389 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	DAM1	P53267	343 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	HST3	P53687	447 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	YNL134C	P53912	376 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	YDR239C	Q03780	787 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	TRS120	Q04183	1289 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	FAR10	Q06001	478 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	CDA1	Q06702	301 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	LUC7	Q07508	261 aa	Predicted RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	MFG1	Q07684	458 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	RFU1	Q08003	200 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	RCL1	Q08096	367 aa	Predicted RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	AIM41	Q12032	185 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	LYS21	Q12122	440 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	RTN2	Q12443	393 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	PAA1	Q12447	191 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	RVB2	Q12464	471 aa	Known RBP	5.73	□□□□□ -1.49
SUB2	YDL084W	AGC1	Q12482	902 aa		5.73	□□□□□ -1.49
SUB2	YDL084W	IQG1	Q12280	1495 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	BNR1	P40450	1375 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	TAF2	P23255	1407 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	RPL27A	P0C2H6	136 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	RPL27B	P0C2H7	136 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	EST1	P17214	699 aa	Predicted RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	HPR1	P17629	752 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	CNA1	P23287	553 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SYP1	P25623	870 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	GCS1	P35197	352 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SCO2	P38072	301 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	ECM31	P38122	312 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	NCL1	P38205	684 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	TSC10	P38342	320 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	PTC7	P38797	343 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	UBA4	P38820	440 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SPC97	P38863	823 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	CYC2	P38909	366 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	YER010C	P40011	234 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	FMC1	P40491	155 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	EFM4	P40516	257 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	CHS6	P40955	746 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	PAC11	P40960	533 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	RPC17	P47076	161 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	PTK2	P47116	818 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	PUS4	P48567	403 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	HSV2	P50079	448 aa	Predicted RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	ZRG17	P53735	605 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SLU7	Q02775	382 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	NOG1	Q02892	647 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	MRP51	Q02950	344 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SSY1	Q03770	852 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	MTQ2	Q03920	221 aa	Predicted RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	MUS81	Q04149	632 aa	Predicted RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	URH1	Q04179	340 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	YMR226C	Q05016	267 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	CIA1	Q05583	330 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	CDA2	Q06703	312 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	RRP40	Q08285	240 aa	Known RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	RSB1	Q08417	382 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SGT1	Q08446	395 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SKI7	Q08491	747 aa	Predicted RBP	5.72	□□□□□ -1.49
SUB2	YDL084W	UAF30	Q08747	228 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	SNF8	Q12483	233 aa		5.72	□□□□□ -1.49
SUB2	YDL084W	CCP1	P00431	361 aa		5.71	□□□□□ -1.5
SUB2	YDL084W	CDC8	P00572	216 aa		5.71	□□□□□ -1.5
SUB2	YDL084W	FRS1	P15624	595 aa	Known RBP	5.71	□□□□□ -1.5
SUB2	YDL084W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
SUB2	YDL084W	SEC18	P18759	758 aa	Known RBP	5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms