RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	VID27	P40157	782 aa		3.97	□□□□□ -1.77
APA1	YCL050C	DUO1	P53168	247 aa	Known RBP	3.97	□□□□□ -1.77
APA1	YCL050C	YGR126W	P53274	230 aa		3.97	□□□□□ -1.77
APA1	YCL050C	RHO4	Q00246	291 aa		3.97	□□□□□ -1.77
APA1	YCL050C	THI20	Q08224	551 aa		3.97	□□□□□ -1.77
APA1	YCL050C	PPT2	Q12036	173 aa		3.97	□□□□□ -1.77
APA1	YCL050C	PEP5	P12868	1029 aa		3.96	□□□□□ -1.78
APA1	YCL050C	KAR3	P17119	729 aa		3.96	□□□□□ -1.78
APA1	YCL050C	SGF29	P25554	259 aa		3.96	□□□□□ -1.78
APA1	YCL050C	MDM31	P38880	579 aa		3.96	□□□□□ -1.78
APA1	YCL050C	CIN4	P39110	191 aa		3.96	□□□□□ -1.78
APA1	YCL050C	SCW10	Q04951	389 aa		3.96	□□□□□ -1.78
APA1	YCL050C	YDL057W	Q07379	328 aa		3.96	□□□□□ -1.78
APA1	YCL050C	PTR2	P32901	601 aa		3.95	□□□□□ -1.78
APA1	YCL050C	DHH1	P39517	506 aa	Known RBP	3.95	□□□□□ -1.78
APA1	YCL050C	SPE4	Q12455	300 aa		3.95	□□□□□ -1.78
APA1	YCL050C	SGS1	P35187	1447 aa		3.95	□□□□□ -1.78
APA1	YCL050C	CAR1	P00812	333 aa	Known RBP	3.94	□□□□□ -1.78
APA1	YCL050C	SEC53	P07283	254 aa	Known RBP	3.94	□□□□□ -1.78
APA1	YCL050C	MRS3	P10566	314 aa		3.94	□□□□□ -1.78
APA1	YCL050C	MTF1	P14908	341 aa	Known RBP	3.94	□□□□□ -1.78
APA1	YCL050C	EST1	P17214	699 aa	Predicted RBP	3.94	□□□□□ -1.78
APA1	YCL050C	NDC1	P32500	655 aa		3.94	□□□□□ -1.78
APA1	YCL050C	PAH1	P32567	862 aa		3.94	□□□□□ -1.78
APA1	YCL050C	SAC6	P32599	642 aa	Known RBP	3.94	□□□□□ -1.78
APA1	YCL050C	CSM2	P40465	213 aa		3.94	□□□□□ -1.78
APA1	YCL050C	APT1	P49435	187 aa	Known RBP	3.94	□□□□□ -1.78
APA1	YCL050C	ALT2	P52892	507 aa		3.94	□□□□□ -1.78
APA1	YCL050C	VID30	P53076	958 aa		3.94	□□□□□ -1.78
APA1	YCL050C	DSD1	P53095	428 aa		3.94	□□□□□ -1.78
APA1	YCL050C	YPL272C	Q08984	517 aa		3.94	□□□□□ -1.78
APA1	YCL050C	YBR298C-A	Q8TGK4	73 aa		3.94	□□□□□ -1.78
APA1	YCL050C	APE1	P14904	514 aa		3.93	□□□□□ -1.78
APA1	YCL050C	BUD14	P27637	709 aa		3.93	□□□□□ -1.78
APA1	YCL050C	SIP2	P34164	415 aa	Known RBP	3.93	□□□□□ -1.78
APA1	YCL050C	SEF1	P34228	1148 aa		3.93	□□□□□ -1.78
APA1	YCL050C	ALG5	P40350	334 aa		3.93	□□□□□ -1.78
APA1	YCL050C	BUD32	P53323	261 aa		3.93	□□□□□ -1.78
APA1	YCL050C	IPI3	P53877	555 aa		3.93	□□□□□ -1.78
APA1	YCL050C	MSC1	Q03104	513 aa		3.93	□□□□□ -1.78
APA1	YCL050C	NGL3	Q03210	505 aa		3.93	□□□□□ -1.78
APA1	YCL050C	YMR087W	Q04299	284 aa		3.93	□□□□□ -1.78
APA1	YCL050C	YKU80	Q04437	629 aa		3.93	□□□□□ -1.78
APA1	YCL050C	ART10	P18634	518 aa	Known RBP	3.92	□□□□□ -1.78
APA1	YCL050C	OSH3	P38713	996 aa	Known RBP	3.92	□□□□□ -1.78
APA1	YCL050C	FLC2	P39719	783 aa		3.92	□□□□□ -1.78
APA1	YCL050C	TMA108	P40462	946 aa		3.92	□□□□□ -1.78
APA1	YCL050C	RTT101	P47050	842 aa		3.92	□□□□□ -1.78
APA1	YCL050C	YEH1	Q07804	573 aa		3.92	□□□□□ -1.78
APA1	YCL050C	YDR056C	Q12025	205 aa		3.92	□□□□□ -1.78
APA1	YCL050C	NMD4	Q12129	218 aa		3.92	□□□□□ -1.78
APA1	YCL050C	SET6	Q12529	373 aa		3.92	□□□□□ -1.78
APA1	YCL050C	RPL15A	P05748	204 aa	Known RBP	3.91	□□□□□ -1.78
APA1	YCL050C	MRP13	P12686	339 aa		3.91	□□□□□ -1.78
APA1	YCL050C	GFD2	P25370	566 aa	Known RBP	3.91	□□□□□ -1.78
APA1	YCL050C	NOP4	P37838	685 aa	Known RBP	3.91	□□□□□ -1.78
APA1	YCL050C	VPS52	P39904	641 aa		3.91	□□□□□ -1.78
APA1	YCL050C	NOP16	P40007	231 aa	Known RBP	3.91	□□□□□ -1.78
APA1	YCL050C	ROK1	P45818	564 aa	Predicted RBP	3.91	□□□□□ -1.78
APA1	YCL050C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
APA1	YCL050C	IMP4	P53941	290 aa	Known RBP	3.91	□□□□□ -1.78
APA1	YCL050C	RPM2	Q02773	1202 aa		3.91	□□□□□ -1.78
APA1	YCL050C	HCR1	Q05775	265 aa	Known RBP	3.91	□□□□□ -1.78
APA1	YCL050C	RCN2	Q12044	265 aa		3.91	□□□□□ -1.78
APA1	YCL050C	HSH49	Q99181	213 aa	Predicted RBP	3.91	□□□□□ -1.78
APA1	YCL050C	YPT6	Q99260	215 aa		3.91	□□□□□ -1.78
APA1	YCL050C	SEM1	O94742	89 aa		3.9	□□□□□ -1.79
APA1	YCL050C	GDH1	P07262	454 aa	Known RBP	3.9	□□□□□ -1.79
APA1	YCL050C	AAC3	P18238	307 aa		3.9	□□□□□ -1.79
APA1	YCL050C	SAN1	P22470	610 aa		3.9	□□□□□ -1.79
APA1	YCL050C	PEP3	P27801	918 aa		3.9	□□□□□ -1.79
APA1	YCL050C	TIF3	P34167	436 aa	Known RBP	3.9	□□□□□ -1.79
APA1	YCL050C	REG2	P38232	338 aa		3.9	□□□□□ -1.79
APA1	YCL050C	YHR210C	P38893	341 aa		3.9	□□□□□ -1.79
APA1	YCL050C	KRE9	P39005	276 aa		3.9	□□□□□ -1.79
APA1	YCL050C	RPH1	P39956	796 aa		3.9	□□□□□ -1.79
APA1	YCL050C	YJL213W	P40896	331 aa		3.9	□□□□□ -1.79
APA1	YCL050C	YFR016C	P43597	1233 aa	Known RBP	3.9	□□□□□ -1.79
APA1	YCL050C	YJR154W	P47181	346 aa		3.9	□□□□□ -1.79
APA1	YCL050C	RBG2	P53295	368 aa	Known RBP	3.9	□□□□□ -1.79
APA1	YCL050C	PRP16	P15938	1071 aa	Predicted RBP	3.89	□□□□□ -1.79
APA1	YCL050C	SGV1	P23293	657 aa	Known RBP	3.89	□□□□□ -1.79
APA1	YCL050C	CPR3	P25719	182 aa		3.89	□□□□□ -1.79
APA1	YCL050C	CCT6	P39079	546 aa		3.89	□□□□□ -1.79
APA1	YCL050C	NPR2	P39923	615 aa		3.89	□□□□□ -1.79
APA1	YCL050C	ALK1	P43633	760 aa	Known RBP	3.89	□□□□□ -1.79
APA1	YCL050C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	RIP-Chip
APA1	YCL050C	TOF2	Q02208	771 aa		3.89	□□□□□ -1.79
APA1	YCL050C	IVY1	Q04934	453 aa		3.89	□□□□□ -1.79
APA1	YCL050C	ERP1	Q05359	219 aa	Known RBP	3.89	□□□□□ -1.79
APA1	YCL050C	THP1	Q08231	455 aa		3.89	□□□□□ -1.79
APA1	YCL050C	NCE102	Q12207	173 aa	RIP-Chip data	3.89	□□□□□ -1.79	not detected
APA1	YCL050C	RAD52	P06778	471 aa	Known RBP	3.88	□□□□□ -1.79
APA1	YCL050C	RPL20A	P0CX23	172 aa	Known RBP	3.88	□□□□□ -1.79
APA1	YCL050C	RPL20B	P0CX24	172 aa	Predicted RBP	3.88	□□□□□ -1.79
APA1	YCL050C	PAP1	P29468	568 aa	Known RBP	3.88	□□□□□ -1.79
APA1	YCL050C	ATS1	P31386	333 aa		3.88	□□□□□ -1.79
APA1	YCL050C	SPC110	P32380	944 aa		3.88	□□□□□ -1.79
APA1	YCL050C	SHP1	P34223	423 aa		3.88	□□□□□ -1.79
APA1	YCL050C	YBP1	P38315	674 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms