RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	IKS1	P47042	667 aa		3.21	□□□□□ -1.89
YCL020W	YCL020W	HUA2	Q12134	243 aa		3.21	□□□□□ -1.89
YCL020W	YCL020W	PHO2	P07269	559 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	PMS1	P14242	873 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	SEC62	P21825	274 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	ELO2	P25358	347 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	BOS1	P25385	244 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	SGF29	P25554	259 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	SNC1	P31109	117 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	ECM15	P35195	104 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	APT1	P49435	187 aa	Known RBP	3.2	□□□□□ -1.9
YCL020W	YCL020W	IMD4	P50094	524 aa	Known RBP	3.2	□□□□□ -1.9
YCL020W	YCL020W	CRZ1	P53968	678 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	SAM50	P53969	484 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	RLI1	Q03195	608 aa	Known RBP	3.2	□□□□□ -1.9
YCL020W	YCL020W	THI20	Q08224	551 aa		3.2	□□□□□ -1.9
YCL020W	YCL020W	CCT4	P39078	528 aa	Known RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	MRX6	P48564	524 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	FMP40	Q08968	688 aa	Predicted RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	YPT6	Q99260	215 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	RAD52	P06778	471 aa	Known RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	PRP16	P15938	1071 aa	Predicted RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	GFD2	P25370	566 aa	Known RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	YCR022C	P25620	114 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	RGT1	P32862	1170 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	SRO77	P38163	1010 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	FAR3	P46671	204 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	YGR126W	P53274	230 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YCL020W	YCL020W	RHO4	Q00246	291 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	SHR3	Q02774	210 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	NOP58	Q12499	511 aa	Known RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	ARP6	Q12509	438 aa		3.19	□□□□□ -1.9
YCL020W	YCL020W	HSH49	Q99181	213 aa	Predicted RBP	3.19	□□□□□ -1.9
YCL020W	YCL020W	RPL15A	P05748	204 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	PEP4	P07267	405 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	APE1	P14904	514 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	ART10	P18634	518 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	BUD14	P27637	709 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	PEP3	P27801	918 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	AGA1	P32323	725 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	FRE1	P32791	686 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	SIP2	P34164	415 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	KEL1	P38853	1164 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	DHH1	P39517	506 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	NOP16	P40007	231 aa	Known RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
YCL020W	YCL020W	AIM22	P47051	409 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	YGR127W	P53275	312 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	RTT103	Q05543	409 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	GLO2	Q05584	274 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	YEH1	Q07804	573 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	BUD21	Q08492	214 aa	Predicted RBP	3.18	□□□□□ -1.9
YCL020W	YCL020W	RLM1	Q12224	676 aa		3.18	□□□□□ -1.9
YCL020W	YCL020W	SEC53	P07283	254 aa	Known RBP	3.17	□□□□□ -1.9
YCL020W	YCL020W	PEP5	P12868	1029 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	MET8	P15807	274 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	PRO3	P32263	286 aa	Known RBP	3.17	□□□□□ -1.9
YCL020W	YCL020W	VPS17	P32913	551 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	OSH3	P38713	996 aa	Known RBP	3.17	□□□□□ -1.9
YCL020W	YCL020W	FLC2	P39719	783 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	DOT5	P40553	215 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	RPR2	P40571	144 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	DIM1	P41819	318 aa	Known RBP	3.17	□□□□□ -1.9
YCL020W	YCL020W	TIM10	P87108	93 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	NMD4	Q12129	218 aa		3.17	□□□□□ -1.9
YCL020W	YCL020W	SEM1	O94742	89 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	OLE1	P21147	510 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	NDC1	P32500	655 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	SAC6	P32599	642 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	PTR2	P32901	601 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	LOS1	P33418	1100 aa	Predicted RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	TCD2	P36101	447 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	YKL023W	P36103	277 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	RRP3	P38712	501 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	ALG5	P40350	334 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	YFR016C	P43597	1233 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	ARE2	P53629	642 aa	Known RBP	3.16	□□□□□ -1.9
YCL020W	YCL020W	YEH2	Q07950	538 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	CDC45	Q08032	650 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	YOR365C	Q08844	703 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	YBR298C-A	Q8TGK4	73 aa		3.16	□□□□□ -1.9
YCL020W	YCL020W	GAL80	P04387	435 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	CBS1	P14066	229 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	SEF1	P34228	1148 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	REG2	P38232	338 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	MTC4	P38335	694 aa	Known RBP	3.15	□□□□□ -1.91
YCL020W	YCL020W	CIN4	P39110	191 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	TMA108	P40462	946 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	RTT101	P47050	842 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	SLD5	Q03406	294 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	YDL121C	Q07541	149 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	THP1	Q08231	455 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	CTI6	Q08923	506 aa		3.15	□□□□□ -1.91
YCL020W	YCL020W	HEM2	P05373	342 aa		3.14	□□□□□ -1.91
YCL020W	YCL020W	GDH1	P07262	454 aa	Known RBP	3.14	□□□□□ -1.91
YCL020W	YCL020W	MSN2	P33748	704 aa		3.14	□□□□□ -1.91
YCL020W	YCL020W	YHR210C	P38893	341 aa		3.14	□□□□□ -1.91
YCL020W	YCL020W	TIF4631	P39935	952 aa	Known RBP	3.14	□□□□□ -1.91
YCL020W	YCL020W	RPH1	P39956	796 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms