RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	UPC2	Q12151	913 aa		4.39	□□□□□ -1.71
SAF1	YBR280C	BAS1	P22035	811 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	ARG1	P22768	420 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	MGT1	P26188	188 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	MKK2	P32491	506 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	SOL2	P37262	315 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	PCH2	P38126	564 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SAF1	YBR280C	TFG1	P41895	735 aa	Predicted RBP	4.38	□□□□□ -1.71
SAF1	YBR280C	FDC1	Q03034	503 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	NUP53	Q03790	475 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	PUS7	Q08647	676 aa	Known RBP	4.38	□□□□□ -1.71
SAF1	YBR280C	AIM41	Q12032	185 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	MRH1	Q12117	320 aa	Predicted RBP	4.38	□□□□□ -1.71
SAF1	YBR280C	ICT1	Q12385	394 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	STE2	D6VTK4	431 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	CDC21	P06785	304 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	YCR102C	P25608	368 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	CDC20	P26309	610 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	MCX1	P38323	520 aa	Predicted RBP	4.38	□□□□□ -1.71
SAF1	YBR280C	GPI16	P38875	610 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	SEC9	P40357	651 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	YGR015C	P53208	328 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	YGR250C	P53316	781 aa	Known RBP	4.38	□□□□□ -1.71
SAF1	YBR280C	ALF1	P53904	254 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	TDA9	Q04545	1251 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	YDR338C	Q05497	695 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	SYT1	Q06836	1226 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	ATG29	Q12092	213 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	TPO4	Q12256	659 aa		4.38	□□□□□ -1.71
SAF1	YBR280C	AI3	P03877	415 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	CKI1	P20485	582 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	YCK2	P23292	546 aa	Known RBP	4.37	□□□□□ -1.71
SAF1	YBR280C	MXR2	P25566	168 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	KIP2	P28743	706 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	TPS2	P31688	896 aa	Known RBP	4.37	□□□□□ -1.71
SAF1	YBR280C	GCD6	P32501	712 aa	Known RBP	4.37	□□□□□ -1.71
SAF1	YBR280C	BEM3	P32873	1128 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	MIA40	P36046	403 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	VHC1	P38329	1120 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	EFM1	P38732	585 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	YHI9	P38765	294 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	MET30	P39014	640 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	GID8	P40208	455 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	NDE1	P40215	560 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	YJR149W	P47177	404 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	YGR012W	P53206	393 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	SPP2	Q02521	185 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	ROY1	Q04847	553 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	YMR034C	Q05131	434 aa	Predicted RBP	4.37	□□□□□ -1.71
SAF1	YBR280C	YPR022C	Q12139	1133 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	PRS5	Q12265	496 aa	Known RBP	4.37	□□□□□ -1.71
SAF1	YBR280C	ZRT2	Q12436	422 aa		4.37	□□□□□ -1.71
SAF1	YBR280C	CYR1	P08678	2026 aa	Known RBP	4.37	□□□□□ -1.71
SAF1	YBR280C	CHA1	P25379	360 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	ADE1	P27616	306 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	BUD14	P27637	709 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	FAA1	P30624	700 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	STO1	P34160	861 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	RRN10	P38204	145 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	MMS21	P38632	267 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	MEP1	P40260	492 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	ATG36	P46983	293 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	HOC1	P47124	396 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	HSV2	P50079	448 aa	Predicted RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	OCA1	P50946	238 aa	Predicted RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	KXD1	P53158	218 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	ATG23	Q06671	453 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	NOP6	Q07623	225 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	CUE5	Q08412	411 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	YOR342C	Q12182	319 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	SEC53	P07283	254 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	RSR1	P13856	272 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	GRR1	P24814	1151 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	YJU2	P28320	278 aa	Predicted RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	RPS27A	P35997	82 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	RPS27B	P38711	82 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	DMA1	P38823	416 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	MNN1	P39106	762 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	HAT2	P39984	401 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	VRG4	P40107	337 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	YIL152W	P40455	235 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	MAD1	P40957	749 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	CUP9	P41817	306 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	LCL3	P53153	274 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	YNR021W	P53723	404 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	ERG13	P54839	491 aa	Known RBP	4.36	□□□□□ -1.71
SAF1	YBR280C	CTR9	P89105	1077 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	CDC123	Q05791	360 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	YPR109W	Q06104	294 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	YOL159C	Q08300	171 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	WTM2	Q12206	467 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	YDL177C	Q12257	170 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	RGT2	Q12300	763 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	NSI1	Q12457	570 aa		4.36	□□□□□ -1.71
SAF1	YBR280C	PRP6	P19735	899 aa	Predicted RBP	4.35	□□□□□ -1.71
SAF1	YBR280C	URA7	P28274	579 aa	Known RBP	4.35	□□□□□ -1.71
SAF1	YBR280C	PET127	P32606	800 aa		4.35	□□□□□ -1.71
SAF1	YBR280C	EAP1	P36041	632 aa	Known RBP	4.35	□□□□□ -1.71
SAF1	YBR280C	YHR112C	P38716	378 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms