RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C RIX7Q07844 837 aaKnown RBP3.03□□□□□ -1.92
TRS20YBR254C CAR1P00812 333 aaKnown RBP3.02□□□□□ -1.93
TRS20YBR254C PMR1P13586 950 aa3.02□□□□□ -1.93
TRS20YBR254C KGD1P20967 1014 aaKnown RBP3.02□□□□□ -1.93
TRS20YBR254C VMA16P23968 213 aa3.02□□□□□ -1.93
TRS20YBR254C BUD5P25300 642 aaPredicted RBP3.02□□□□□ -1.93
TRS20YBR254C ADH7P25377 361 aa3.02□□□□□ -1.93
TRS20YBR254C YKL100CP34248 587 aa3.02□□□□□ -1.93
TRS20YBR254C TUL1P36096 758 aa3.02□□□□□ -1.93
TRS20YBR254C SHR3Q02774 210 aa3.02□□□□□ -1.93
TRS20YBR254C MSC1Q03104 513 aa3.02□□□□□ -1.93
TRS20YBR254C BNA5Q05979 453 aa3.02□□□□□ -1.93
TRS20YBR254C YDL009CQ12210 107 aa3.02□□□□□ -1.93
TRS20YBR254C PEP5P12868 1029 aa3.01□□□□□ -1.93
TRS20YBR254C ATR1P13090 542 aa3.01□□□□□ -1.93
TRS20YBR254C SLC1P33333 303 aa3.01□□□□□ -1.93
TRS20YBR254C SHO1P40073 367 aa3.01□□□□□ -1.93
TRS20YBR254C SCD6P45978 349 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
TRS20YBR254C SNG1P46950 547 aa3.01□□□□□ -1.93
TRS20YBR254C ENT4Q07872 247 aa3.01□□□□□ -1.93
TRS20YBR254C SDH5Q08230 162 aa3.01□□□□□ -1.93
TRS20YBR254C BSC6Q08280 497 aa3.01□□□□□ -1.93
TRS20YBR254C ETT1Q08421 412 aaKnown RBP3.01□□□□□ -1.93
TRS20YBR254C HNT3Q08702 217 aa3.01□□□□□ -1.93
TRS20YBR254C CBF2P32504 956 aa3□□□□□ -1.93
TRS20YBR254C FRE1P32791 686 aa3□□□□□ -1.93
TRS20YBR254C PTH2P34222 208 aa3□□□□□ -1.93
TRS20YBR254C PRE5P40302 234 aaKnown RBP3□□□□□ -1.93
TRS20YBR254C PTR3P43606 678 aa3□□□□□ -1.93
TRS20YBR254C DRN1P53255 507 aaKnown RBP3□□□□□ -1.93
TRS20YBR254C EFM6P53970 246 aa3□□□□□ -1.93
TRS20YBR254C NCE102Q12207 173 aaRIP-Chip data3□□□□□ -1.93not detected
TRS20YBR254C YER078W-AQ3E7A2 54 aa3□□□□□ -1.93
TRS20YBR254C PUP3P25451 205 aaKnown RBP2.99□□□□□ -1.93
TRS20YBR254C SGF29P25554 259 aa2.99□□□□□ -1.93
TRS20YBR254C YBL055CP34220 418 aaPredicted RBP2.99□□□□□ -1.93
TRS20YBR254C NUP133P36161 1157 aa2.99□□□□□ -1.93
TRS20YBR254C RRT2P38332 387 aa2.99□□□□□ -1.93
TRS20YBR254C SIP4P46954 829 aa2.99□□□□□ -1.93
TRS20YBR254C ALT2P52892 507 aa2.99□□□□□ -1.93
TRS20YBR254C DSD1P53095 428 aa2.99□□□□□ -1.93
TRS20YBR254C MSO1P53604 210 aaKnown RBP2.99□□□□□ -1.93
TRS20YBR254C SLD5Q03406 294 aa2.99□□□□□ -1.93
TRS20YBR254C MRPL51Q06090 140 aaPredicted RBP2.99□□□□□ -1.93
TRS20YBR254C NBP2Q12163 236 aa2.99□□□□□ -1.93
TRS20YBR254C BOS1P25385 244 aa2.98□□□□□ -1.93
TRS20YBR254C FUN19P28003 413 aaPredicted RBP2.98□□□□□ -1.93
TRS20YBR254C YEL045CP32616 141 aa2.98□□□□□ -1.93
TRS20YBR254C YKL023WP36103 277 aaKnown RBP2.98□□□□□ -1.93
TRS20YBR254C MAL33P38157 468 aa2.98□□□□□ -1.93
TRS20YBR254C RFS1P38234 210 aaKnown RBP2.98□□□□□ -1.93
TRS20YBR254C ALG8P40351 577 aa2.98□□□□□ -1.93
TRS20YBR254C YGR021WP53212 290 aa2.98□□□□□ -1.93
TRS20YBR254C VIP1Q06685 1146 aaKnown RBP2.98□□□□□ -1.93
TRS20YBR254C TCO89Q08921 799 aa2.98□□□□□ -1.93
TRS20YBR254C CTF3Q12748 733 aa2.98□□□□□ -1.93
TRS20YBR254C RNA14P25298 677 aaKnown RBP2.97□□□□□ -1.93
TRS20YBR254C PUT3P25502 979 aaPredicted RBP2.97□□□□□ -1.93
TRS20YBR254C IMG1P25626 169 aa2.97□□□□□ -1.93
TRS20YBR254C RPL32P38061 130 aaKnown RBP2.97□□□□□ -1.93
TRS20YBR254C ICS2P38284 255 aa2.97□□□□□ -1.93
TRS20YBR254C HAT2P39984 401 aa2.97□□□□□ -1.93
TRS20YBR254C YJR154WP47181 346 aa2.97□□□□□ -1.93
TRS20YBR254C RAD30Q04049 632 aa2.97□□□□□ -1.93
TRS20YBR254C YDL057WQ07379 328 aa2.97□□□□□ -1.93
TRS20YBR254C YOR387CQ08910 206 aa2.97□□□□□ -1.93
TRS20YBR254C RAD52P06778 471 aaKnown RBP2.96□□□□□ -1.94
TRS20YBR254C IES5P40060 125 aa2.96□□□□□ -1.94
TRS20YBR254C KAP123P40069 1113 aaKnown RBP2.96□□□□□ -1.94
TRS20YBR254C FAR3P46671 204 aa2.96□□□□□ -1.94
TRS20YBR254C YGR126WP53274 230 aa2.96□□□□□ -1.94
TRS20YBR254C YGR127WP53275 312 aa2.96□□□□□ -1.94
TRS20YBR254C YPL272CQ08984 517 aa2.96□□□□□ -1.94
TRS20YBR254C ARD1P07347 238 aaPredicted RBP2.95□□□□□ -1.94
TRS20YBR254C YCR007CP25354 239 aa2.95□□□□□ -1.94
TRS20YBR254C NAM9P27929 486 aa2.95□□□□□ -1.94
TRS20YBR254C AUR1P36107 401 aaPredicted RBP2.95□□□□□ -1.94
TRS20YBR254C APT1P49435 187 aaKnown RBP2.95□□□□□ -1.94
TRS20YBR254C CBK1P53894 756 aa2.95□□□□□ -1.94
TRS20YBR254C IRC15Q02733 499 aa2.95□□□□□ -1.94
TRS20YBR254C YOR365CQ08844 703 aa2.95□□□□□ -1.94
TRS20YBR254C SUC2P00724 532 aa2.94□□□□□ -1.94
TRS20YBR254C MRS6P32864 603 aaKnown RBP2.94□□□□□ -1.94
TRS20YBR254C YBR144CP34215 104 aa2.94□□□□□ -1.94
TRS20YBR254C MTC6P38849 526 aa2.94□□□□□ -1.94
TRS20YBR254C PTH1P38876 190 aaKnown RBP2.94□□□□□ -1.94
TRS20YBR254C YHR210CP38893 341 aa2.94□□□□□ -1.94
TRS20YBR254C YJR008WP47085 338 aa2.94□□□□□ -1.94
TRS20YBR254C RTS3P53289 263 aa2.94□□□□□ -1.94
TRS20YBR254C IVY1Q04934 453 aa2.94□□□□□ -1.94
TRS20YBR254C HEL2Q05580 639 aaKnown RBP2.94□□□□□ -1.94
TRS20YBR254C LUC7Q07508 261 aaPredicted RBP2.94□□□□□ -1.94
TRS20YBR254C SPT15P13393 240 aaKnown RBP2.93□□□□□ -1.94
TRS20YBR254C CPR1P14832 162 aaKnown RBP2.93□□□□□ -1.94
TRS20YBR254C YIM1P28625 365 aa2.93□□□□□ -1.94
TRS20YBR254C DEG1P31115 442 aaKnown RBP2.93□□□□□ -1.94
TRS20YBR254C SSE2P32590 693 aaKnown RBP2.93□□□□□ -1.94
TRS20YBR254C UTR4P32626 227 aa2.93□□□□□ -1.94
TRS20YBR254C ARC1P46672 376 aaKnown RBP2.93□□□□□ -1.94
TRS20YBR254C PAL1Q05518 499 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms