RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeast

Gene RPB5, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB5	YBR154C	LPD1	P09624	499 aa	Known RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	AMD1	P15274	810 aa	Known RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	BUD5	P25300	642 aa	Predicted RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	LSB5	P25369	354 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	DEG1	P31115	442 aa	Known RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	HXT1	P32465	570 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	CBF2	P32504	956 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	MSN2	P33748	704 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
RPB5	YBR154C	YKL023W	P36103	277 aa	Known RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	PTH1	P38876	190 aa	Known RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	PTR3	P43606	678 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	YGR127W	P53275	312 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	WSC2	P53832	503 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	INN1	P53901	409 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	RLI1	Q03195	608 aa	Known RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	MRPL51	Q06090	140 aa	Predicted RBP	2.66	□□□□□ -1.98
RPB5	YBR154C	SYO1	Q07395	620 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	TEN1	Q07921	160 aa		2.66	□□□□□ -1.98
RPB5	YBR154C	PUT3	P25502	979 aa	Predicted RBP	2.65	□□□□□ -1.99
RPB5	YBR154C	FUN19	P28003	413 aa	Predicted RBP	2.65	□□□□□ -1.99
RPB5	YBR154C	YME1	P32795	747 aa		2.65	□□□□□ -1.99
RPB5	YBR154C	ALY1	P36117	915 aa		2.65	□□□□□ -1.99
RPB5	YBR154C	FMP10	P40098	244 aa		2.65	□□□□□ -1.99
RPB5	YBR154C	PIL1	P53252	339 aa	Known RBP	2.65	□□□□□ -1.99
RPB5	YBR154C	UBX4	P54730	416 aa		2.65	□□□□□ -1.99
RPB5	YBR154C	VPS74	Q06385	345 aa		2.65	□□□□□ -1.99
RPB5	YBR154C	SUI2	P20459	304 aa	Known RBP	2.64	□□□□□ -1.99
RPB5	YBR154C	PWP1	P21304	576 aa	Known RBP	2.64	□□□□□ -1.99
RPB5	YBR154C	SGF29	P25554	259 aa		2.64	□□□□□ -1.99
RPB5	YBR154C	MRP20	P32387	263 aa		2.64	□□□□□ -1.99
RPB5	YBR154C	YBL059W	P34224	193 aa		2.64	□□□□□ -1.99
RPB5	YBR154C	MTR2	P34232	184 aa	Known RBP	2.64	□□□□□ -1.99
RPB5	YBR154C	DPB4	Q04603	196 aa	Known RBP	2.64	□□□□□ -1.99
RPB5	YBR154C	BNA5	Q05979	453 aa		2.64	□□□□□ -1.99
RPB5	YBR154C	YOR387C	Q08910	206 aa		2.64	□□□□□ -1.99
RPB5	YBR154C	YER078W-A	Q3E7A2	54 aa		2.64	□□□□□ -1.99
RPB5	YBR154C	APA1	P16550	321 aa	Known RBP	2.63	□□□□□ -1.99
RPB5	YBR154C	EXO70	P19658	623 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	YCR022C	P25620	114 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	NDT80	P38830	627 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	YGR210C	P42942	411 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
RPB5	YBR154C	SNG1	P46950	547 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	AAD10	P47182	288 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	RRT6	P53117	311 aa	Predicted RBP	2.63	□□□□□ -1.99
RPB5	YBR154C	IRC15	Q02733	499 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	RRN11	Q04712	507 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	TRM8	Q12009	286 aa		2.63	□□□□□ -1.99
RPB5	YBR154C	HHF1	P02309	103 aa	Known RBP	2.62	□□□□□ -1.99
RPB5	YBR154C	CPR1	P14832	162 aa	Known RBP	2.62	□□□□□ -1.99
RPB5	YBR154C	YCR007C	P25354	239 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	BOS1	P25385	244 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	ICS2	P38284	255 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	ELP2	P42935	788 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	FAR3	P46671	204 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	YJR154W	P47181	346 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	RTT109	Q07794	436 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	TMC1	Q08422	150 aa	Predicted RBP	2.62	□□□□□ -1.99
RPB5	YBR154C	TCO89	Q08921	799 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	CTF3	Q12748	733 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	SSM4	P40318	1319 aa		2.62	□□□□□ -1.99
RPB5	YBR154C	SNF1	P06782	633 aa	Known RBP	2.61	□□□□□ -1.99
RPB5	YBR154C	PWP2	P25635	923 aa	Known RBP	2.61	□□□□□ -1.99
RPB5	YBR154C	NAM9	P27929	486 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	FRE1	P32791	686 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	YBL055C	P34220	418 aa	Predicted RBP	2.61	□□□□□ -1.99
RPB5	YBR154C	PTH2	P34222	208 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	SUB1	P54000	292 aa	Known RBP	2.61	□□□□□ -1.99
RPB5	YBR154C	SLD5	Q03406	294 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	IVY1	Q04934	453 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	VID22	Q05934	901 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	MHR1	Q06630	226 aa		2.61	□□□□□ -1.99
RPB5	YBR154C	LSP1	Q12230	341 aa	Known RBP	2.61	□□□□□ -1.99
RPB5	YBR154C	NAT1	P12945	854 aa	Known RBP	2.6	□□□□□ -1.99
RPB5	YBR154C	ARO2	P28777	376 aa	Known RBP	2.6	□□□□□ -1.99
RPB5	YBR154C	DBF20	P32328	564 aa		2.6	□□□□□ -1.99
RPB5	YBR154C	VPS24	P36095	224 aa	Known RBP	2.6	□□□□□ -1.99
RPB5	YBR154C	HAT2	P39984	401 aa		2.6	□□□□□ -1.99
RPB5	YBR154C	YFL067W	P43537	175 aa		2.6	□□□□□ -1.99
RPB5	YBR154C	YGR126W	P53274	230 aa		2.6	□□□□□ -1.99
RPB5	YBR154C	BUD32	P53323	261 aa		2.6	□□□□□ -1.99
RPB5	YBR154C	EFM6	P53970	246 aa		2.6	□□□□□ -1.99
RPB5	YBR154C	VMS1	Q04311	632 aa	Known RBP	2.6	□□□□□ -1.99
RPB5	YBR154C	SGV1	P23293	657 aa	Known RBP	2.59	□□□□□ -1.99
RPB5	YBR154C	PUP3	P25451	205 aa	Known RBP	2.59	□□□□□ -1.99
RPB5	YBR154C	PRS1	P32895	427 aa	Known RBP	2.59	□□□□□ -1.99
RPB5	YBR154C	MRP4	P32902	394 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	SWE1	P32944	819 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	NUP133	P36161	1157 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	RPL32	P38061	130 aa	Known RBP	2.59	□□□□□ -1.99
RPB5	YBR154C	PSY4	P38193	441 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	SAP185	P40856	1058 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	DSD1	P53095	428 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	ELP3	Q02908	557 aa	Known RBP	2.59	□□□□□ -1.99
RPB5	YBR154C	PBA1	Q05778	276 aa		2.59	□□□□□ -1.99
RPB5	YBR154C	RRG7	Q08774	242 aa	Predicted RBP	2.59	□□□□□ -1.99
RPB5	YBR154C	PRE8	P23639	250 aa		2.58	□□□□□ -2
RPB5	YBR154C	RNA14	P25298	677 aa	Known RBP	2.58	□□□□□ -2
RPB5	YBR154C	IMG1	P25626	169 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms