RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DRC1Q96MC2 740 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 NUP58Q9BVL2 599 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 CAPN6Q9Y6Q1 641 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
SNIP1-204ENST00000638725 CCNE1P24864 410 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 KIF5BP33176 963 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CRKLP46109 303 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 PDE4DQ08499 809 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 KIF5AQ12840 1032 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 STK4Q13043 487 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CAVIN4Q5BKX8 364 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 MIIPQ5JXC2 388 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 NOC3LQ8WTT2 800 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 HDAC7Q8WUI4 952 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 DHTKD1Q96HY7 919 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 NOC4LQ9BVI4 516 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 M0R2N6 131 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 FCER1AP12319 257 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 MECOMQ03112 1051 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 UBE4AQ14139 1066 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CREG2Q8IUH2 290 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 FAM76AQ8TAV0 307 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 AENQ8WTP8 325 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 RRP36Q96EU6 259 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 MLXIPQ9HAP2 919 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 DMGDHQ9UI17 866 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 GOLGA6BA6NDN3 693 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 PLCG1P19174 1290 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 KLRK1P26718 216 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 CRNKL1Q9BZJ0 848 aaKnown RBP12.18□□□□□ -0.46
SNIP1-204ENST00000638725 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 FAM184BQ9ULE4 1060 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 SNX12Q9UMY4 172 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 TAF1P21675 1872 aa12.18□□□□□ -0.46
SNIP1-204ENST00000638725 XIRP1Q702N8 1843 aaKnown RBP12.17□□□□□ -0.46
SNIP1-204ENST00000638725 FLT1P17948 1338 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 GOLGA6CA6NDK9 693 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 MYL1P05976 194 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 GOLGA6DP0CG33 693 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 ASIC1P78348 528 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 SPA17Q15506 151 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 TTC31Q49AM3 519 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-204ENST00000638725 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-204ENST00000638725 PNMA1Q8ND90 353 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 LRRC1Q9BTT6 524 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 GOLGA6AQ9NYA3 693 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 SMARCAL1Q9NZC9 954 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 BICDL2A1A5D9 508 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 EPHB6O15197 1021 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 MOCS3O95396 460 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 PRDX5P30044 214 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNIP1-204ENST00000638725 IQCEQ6IPM2 695 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 CABP7Q86V35 215 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 ERGIC2Q96RQ1 377 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 PSMB7Q99436 277 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 EHD4Q9H223 541 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
SNIP1-204ENST00000638725 RREB1Q92766 1687 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 SHOX2O60902 331 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-204ENST00000638725 SLC7A5Q01650 507 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 TFAP4Q01664 338 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
SNIP1-204ENST00000638725 MMGT1Q8N4V1 131 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 TRIM58Q8NG06 486 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
SNIP1-204ENST00000638725 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 RABEP2Q9H5N1 569 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 LAMB1P07942 1786 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 TACC1O75410 805 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms