RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 MCTP2Q6DN12 878 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 CCDC12Q8WUD4 166 aaPredicted RBP8.26□□□□□ -1.09
MECP2-225ENST00000638041 MAP4K1Q92918 833 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 RRP36Q96EU6 259 aaKnown RBP8.26□□□□□ -1.09
MECP2-225ENST00000638041 IWS1Q96ST2 819 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 MTIF3Q9H2K0 278 aaKnown RBP8.26□□□□□ -1.09
MECP2-225ENST00000638041 IL17RBQ9NRM6 502 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 POLR3EQ9NVU0 708 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 Q9Y3F1 56 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 SLC12A7Q9Y666 1083 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 PLXNB2O15031 1838 aa8.26□□□□□ -1.09
MECP2-225ENST00000638041 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 E7EWF7 191 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 STAM2O75886 525 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 CYBAP13498 195 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 NOVP48745 357 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 CACNB1Q02641 598 aaPredicted RBP8.25□□□□□ -1.09
MECP2-225ENST00000638041 TNFAIP2Q03169 654 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 TTLL4Q14679 1199 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 STXBP2Q15833 593 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 ARHGEF16Q5VV41 709 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 NSUN6Q8TEA1 469 aaKnown RBP8.25□□□□□ -1.09
MECP2-225ENST00000638041 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 ESYT1Q9BSJ8 1104 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.25□□□□□ -1.09
MECP2-225ENST00000638041 TCEAL9Q9UHQ7 104 aa8.25□□□□□ -1.09
MECP2-225ENST00000638041 RBM8AQ9Y5S9 174 aaKnown RBP8.25□□□□□ -1.09
MECP2-225ENST00000638041 FRMPD2Q68DX3 1309 aaPredicted RBP8.25□□□□□ -1.09
MECP2-225ENST00000638041 hCG_1984214I3L0E3 225 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 ZBTB5O15062 677 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 PGK2P07205 417 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 C6orf222P0C671 652 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 SUPT20HL2P0C7V6 817 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 SNHG28P0DPA3 235 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 GSPT1P15170 499 aaKnown RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 CALML3P27482 149 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 CCND3P30281 292 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 LIFRP42702 1097 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 CDC37Q16543 378 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 CCL14Q16627 93 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 GNASQ5JWF2 1037 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 ARMCX2Q7L311 632 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 ZNF713Q8N859 430 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 ENAHQ8N8S7 591 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 GIMAP8Q8ND71 665 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 REPS2Q8NFH8 660 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 NPLOC4Q8TAT6 608 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 SCFD2Q8WU76 684 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 CDHR1Q96JP9 859 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 NEK1Q96PY6 1258 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 VAT1LQ9HCJ6 419 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 STARD7Q9NQZ5 370 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 CYP39A1Q9NYL5 469 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 NAP1L2Q9ULW6 460 aaPredicted RBP8.24□□□□□ -1.09
MECP2-225ENST00000638041 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 ELP1O95163 1332 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 NEDD4P46934 1319 aa8.24□□□□□ -1.09
MECP2-225ENST00000638041 A0A0G2JMZ2 1700 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 GREB1LQ9C091 1923 aaPredicted RBP8.23□□□□□ -1.09
MECP2-225ENST00000638041 DNAJC25-GNG10A0A024R161 153 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 PNMA6FA0A0J9YX94 578 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 GCOM1H8Y6P7 765 aaPredicted RBP8.23□□□□□ -1.09
MECP2-225ENST00000638041 PRC1O43663 620 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 NMT2O60551 498 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 COBLO75128 1261 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 CYP21A2P08686 494 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 POLR2MP0CAP2 368 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 XBP1P17861 261 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 PDE4AP27815 886 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 SLC16A2P36021 539 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 RCAN1P53805 252 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 EVX2Q03828 476 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 USH1GQ495M9 461 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 KIAA1755Q5JYT7 1200 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 XRRA1Q6P2D8 792 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 TBC1D10CQ8IV04 446 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 CCDC144CPQ8IYA2 1237 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 C7orf61Q8IZ16 206 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 ADGRF4Q8IZF3 695 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 SMARCC2Q8TAQ2 1214 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 KATNAL1Q9BW62 490 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 UPF2Q9HAU5 1272 aaKnown RBP8.23□□□□□ -1.09
MECP2-225ENST00000638041 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
MECP2-225ENST00000638041 NOD1Q9Y239 953 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 PCDHA1Q9Y5I3 950 aa8.23□□□□□ -1.09
MECP2-225ENST00000638041 LAMA4Q16363 1823 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 A0A0U1RQG5 324 aaPredicted RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 SPDYE3A6NKU9 549 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 EIF3JO75822 258 aaKnown RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 CFBP00751 764 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 TGFB3P10600 412 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 RAG1P15918 1043 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 CCND2P30279 289 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 BAATQ14032 418 aaPredicted RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms