RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TRIM60Q495X7 471 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 SLC30A10Q6XR72 485 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 RUFY2Q8WXA3 655 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 CLEC4DQ8WXI8 215 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 ANKS1AQ92625 1134 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 KRT23Q9C075 422 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 KAT14Q9H8E8 782 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 ATP11BQ9Y2G3 1177 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 BAATQ14032 418 aaPredicted RBP20.78■□□□□ 0.92
PNKP-230ENST00000638016 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
PNKP-230ENST00000638016 SLC39A5Q6ZMH5 540 aa20.78■□□□□ 0.92
PNKP-230ENST00000638016 EEPD1Q7L9B9 569 aa20.78■□□□□ 0.92
PNKP-230ENST00000638016 SENP2Q9HC62 589 aa20.78■□□□□ 0.92
PNKP-230ENST00000638016 FAM184BQ9ULE4 1060 aa20.78■□□□□ 0.92
PNKP-230ENST00000638016 MDM2Q00987 491 aaPredicted RBP20.77■□□□□ 0.92
PNKP-230ENST00000638016 SEC23AQ15436 765 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 USH1GQ495M9 461 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 TMEM63BQ5T3F8 832 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 ABHD16BQ9H3Z7 469 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 CNNM2Q9H8M5 875 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 PHF24Q9UPV7 400 aa20.77■□□□□ 0.92
PNKP-230ENST00000638016 MYH6P13533 1939 aa20.76■□□□□ 0.91
PNKP-230ENST00000638016 LTBP2Q14767 1821 aa20.76■□□□□ 0.91
PNKP-230ENST00000638016 SOX1O00570 391 aaPredicted RBP20.76■□□□□ 0.91
PNKP-230ENST00000638016 COL9A3Q14050 684 aaPredicted RBP20.76■□□□□ 0.91
PNKP-230ENST00000638016 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
PNKP-230ENST00000638016 RNF180Q86T96 592 aa20.76■□□□□ 0.91
PNKP-230ENST00000638016 FBXO16Q8IX29 292 aaPredicted RBP20.76■□□□□ 0.91
PNKP-230ENST00000638016 STAG2Q8N3U4 1231 aa20.76■□□□□ 0.91
PNKP-230ENST00000638016 PDGFCQ9NRA1 345 aa20.76■□□□□ 0.91
PNKP-230ENST00000638016 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
PNKP-230ENST00000638016 A0A1W2PQ45 241 aaPredicted RBP20.75■□□□□ 0.91
PNKP-230ENST00000638016 A0A1W2PQY0 241 aa20.75■□□□□ 0.91
PNKP-230ENST00000638016 PTPDC1A2A3K4 754 aa20.75■□□□□ 0.91
PNKP-230ENST00000638016 SNX17Q15036 470 aa20.75■□□□□ 0.91
PNKP-230ENST00000638016 CDC37Q16543 378 aaPredicted RBP20.75■□□□□ 0.91
PNKP-230ENST00000638016 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
PNKP-230ENST00000638016 IFIT1BQ5T764 474 aaKnown RBP20.75■□□□□ 0.91
PNKP-230ENST00000638016 ADGRF4Q8IZF3 695 aa20.75■□□□□ 0.91
PNKP-230ENST00000638016 RBM8AQ9Y5S9 174 aaKnown RBP20.75■□□□□ 0.91
PNKP-230ENST00000638016 E7EWF7 191 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 DUSP11O75319 330 aaKnown RBP20.74■□□□□ 0.91
PNKP-230ENST00000638016 CALML3P27482 149 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 CCDC178Q5BJE1 867 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 CCSAPQ6IQ19 270 aaPredicted RBP20.74■□□□□ 0.91
PNKP-230ENST00000638016 CENPQQ7L2Z9 268 aaPredicted RBP20.74■□□□□ 0.91
PNKP-230ENST00000638016 SH3RF1Q7Z6J0 888 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 KLHDC9Q8NEP7 349 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 MAP4K1Q92918 833 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 BAZ2BQ9UIF8 2168 aaKnown RBP20.74■□□□□ 0.91
PNKP-230ENST00000638016 WDR19Q8NEZ3 1342 aa20.74■□□□□ 0.91
PNKP-230ENST00000638016 ASB14A6NK59 587 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 CTAGE5O15320 804 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 PARP1P09874 1014 aaKnown RBP20.73■□□□□ 0.91
PNKP-230ENST00000638016 C6orf222P0C671 652 aaPredicted RBP20.73■□□□□ 0.91
PNKP-230ENST00000638016 NT5C2P49902 561 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 ALDH5A1P51649 535 aaPredicted RBP20.73■□□□□ 0.91
PNKP-230ENST00000638016 ACLYP53396 1101 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 ANTXR2P58335 489 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 KCNA10Q16322 511 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 TBC1D5Q92609 795 aa20.73■□□□□ 0.91
PNKP-230ENST00000638016 LSG1Q9H089 658 aaKnown RBP20.73■□□□□ 0.91
PNKP-230ENST00000638016 PRDM5Q9NQX1 630 aaPredicted RBP20.73■□□□□ 0.91
PNKP-230ENST00000638016 RPS6P62753 249 aaKnown RBP20.72■□□□□ 0.91
PNKP-230ENST00000638016 BEX3Q00994 111 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 QRICH1Q2TAL8 776 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 ASPRV1Q53RT3 343 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 TAPT1Q6NXT6 567 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 RNF207Q6ZRF8 634 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 LRCH3Q96II8 777 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 ESYT1Q9BSJ8 1104 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 GPHNQ9NQX3 736 aaPredicted RBP20.72■□□□□ 0.91
PNKP-230ENST00000638016 PDLIM7Q9NR12 457 aa20.72■□□□□ 0.91
PNKP-230ENST00000638016 DHX16O60231 1041 aaKnown RBP20.71■□□□□ 0.91
PNKP-230ENST00000638016 SMPD1P17405 629 aa20.71■□□□□ 0.91
PNKP-230ENST00000638016 BMP8BP34820 402 aa20.71■□□□□ 0.91
PNKP-230ENST00000638016 TLE2Q04725 743 aa20.71■□□□□ 0.91
PNKP-230ENST00000638016 TRDNQ13061 729 aa20.71■□□□□ 0.91
PNKP-230ENST00000638016 NOL8Q76FK4 1167 aaKnown RBP20.71■□□□□ 0.91
PNKP-230ENST00000638016 UBE2OQ9C0C9 1292 aaKnown RBP20.71■□□□□ 0.91
PNKP-230ENST00000638016 UPF3AQ9H1J1 476 aaKnown RBP20.71■□□□□ 0.91
PNKP-230ENST00000638016 JMJD4Q9H9V9 463 aa20.71■□□□□ 0.91
PNKP-230ENST00000638016 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
PNKP-230ENST00000638016 TRIM43BA6NCK2 446 aa20.7■□□□□ 0.9
PNKP-230ENST00000638016 IFIT3O14879 490 aaKnown RBP20.7■□□□□ 0.9
PNKP-230ENST00000638016 GJA9P57773 515 aa20.7■□□□□ 0.9
PNKP-230ENST00000638016 TNFAIP2Q03169 654 aa20.7■□□□□ 0.9
PNKP-230ENST00000638016 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
PNKP-230ENST00000638016 MB21D2Q8IYB1 491 aaPredicted RBP20.7■□□□□ 0.9
PNKP-230ENST00000638016 NCOA7Q8NI08 942 aa20.7■□□□□ 0.9
PNKP-230ENST00000638016 MORC4Q8TE76 937 aa20.7■□□□□ 0.9
PNKP-230ENST00000638016 TRIM43Q96BQ3 446 aaPredicted RBP20.7■□□□□ 0.9
PNKP-230ENST00000638016 MAD2L2Q9UI95 211 aa20.7■□□□□ 0.9
PNKP-230ENST00000638016 PQBP1O60828 265 aaKnown RBP20.69■□□□□ 0.9
PNKP-230ENST00000638016 PPP1R11O60927 126 aaPredicted RBP20.69■□□□□ 0.9
PNKP-230ENST00000638016 ASGR1P07306 291 aa20.69■□□□□ 0.9
PNKP-230ENST00000638016 ITGB8P26012 769 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms