RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 ALAS1P13196 640 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 CALML3P27482 149 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 DDIT3P35638 169 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 NLRP5P59047 1200 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 ERVK-24P63145 666 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 CCNA1P78396 465 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 PLS1Q14651 629 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 KRT40Q6A162 431 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 SHISA4Q96DD7 197 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 PHF20Q9BVI0 1012 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 ZMYND12Q9H0C1 365 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 GLT8D2Q9H1C3 349 aa15.38■□□□□ 0.05
CHRNA4-216ENST00000636652 MMP1P03956 469 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 TAL1P17542 331 aaPredicted RBP15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 GNA11P29992 359 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 ADCY7P51828 1080 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 FOSBP53539 338 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 CRHR2Q13324 411 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 ANKRD13CQ8N6S4 541 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 DAGLBQ8NCG7 672 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 CHST13Q8NET6 341 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 CFHR5Q9BXR6 569 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 MOV10L1Q9BXT6 1211 aaKnown RBP15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 MAF1Q9H063 256 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 GJB4Q9NTQ9 266 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 RNF146Q9NTX7 359 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 KCNJ14Q9UNX9 436 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 RIPK3Q9Y572 518 aa15.37■□□□□ 0.05
CHRNA4-216ENST00000636652 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 STX6O43752 255 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 BCRP11274 1271 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 GHRHRQ02643 423 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 C17orf99Q6UX52 265 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 MCF2L2Q86YR7 1114 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 SAMD3Q8N6K7 520 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 BICD2Q8TD16 824 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 CUL5Q93034 780 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 MROH8Q9H579 483 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 ACAD9Q9H845 621 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 PSTPIP2Q9H939 334 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 RIC8AQ9NPQ8 531 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 CPA4Q9UI42 421 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 PCDHA4Q9UN74 947 aa15.36■□□□□ 0.05
CHRNA4-216ENST00000636652 VPS37CA5D8V6 355 aaPredicted RBP15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 PIK3CDO00329 1044 aa15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 OPLAHO14841 1288 aa15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 PEX10O60683 326 aa15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 NPY5RQ15761 445 aa15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 Q3C1V9 767 aa15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 MTMR6Q9Y217 621 aa15.35■□□□□ 0.05
CHRNA4-216ENST00000636652 BAZ2BQ9UIF8 2168 aaKnown RBP15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 NFIBO00712 420 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 ERCC3P19447 782 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 KRT2P35908 639 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 NUCB2P80303 420 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 MUM1L1Q5H9M0 696 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 MCTP2Q6DN12 878 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 NCAPG2Q86XI2 1143 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 DIS3L2Q8IYB7 885 aaKnown RBP15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 BLIDQ8IZY5 108 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 FOXP1Q9H334 677 aaPredicted RBP15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 RNF186Q9NXI6 227 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 SAGE1Q9NXZ1 904 aa15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 MAP3K20Q9NYL2 800 aaKnown RBP15.34■□□□□ 0.05
CHRNA4-216ENST00000636652 GCOM1H8Y6P7 765 aaPredicted RBP15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 POLR2MP0CAP2 368 aa15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 MAPK4P31152 587 aa15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 HSD17B4P51659 736 aa15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 MAP2K1Q02750 393 aaPredicted RBP15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 PORCNQ9H237 461 aa15.33■□□□□ 0.04
CHRNA4-216ENST00000636652 COL11A1P12107 1806 aaPredicted RBP15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 M0R2N6 131 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 MEIS2O14770 477 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 BRD1O95696 1058 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 CFBP00751 764 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 ZSCAN22P10073 491 aaPredicted RBP15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 U2AF2P26368 475 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 CLK2P49760 499 aaKnown RBP15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 AP3B2Q13367 1082 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 PKP1Q13835 747 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 RNF207Q6ZRF8 634 aa15.32■□□□□ 0.04
CHRNA4-216ENST00000636652 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms