RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 SPC25Q9HBM1 224 aa8.76□□□□□ -1.01
TCF4-266ENST00000628689 CLDND1Q9NY35 253 aa8.76□□□□□ -1.01
TCF4-266ENST00000628689 C9orf78Q9NZ63 289 aaPredicted RBP8.76□□□□□ -1.01
TCF4-266ENST00000628689 ZHX1Q9UKY1 873 aaPredicted RBP8.76□□□□□ -1.01
TCF4-266ENST00000628689 MAST4O15021 2626 aa8.76□□□□□ -1.01
TCF4-266ENST00000628689 CACNA1FO60840 1977 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 A0A1B0GUL7 405 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 CYP2C9P11712 490 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 NKX3-2P78367 333 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 MCTP2Q6DN12 878 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 TEX11Q8IYF3 940 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 KIAA2013Q8IYS2 634 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 CRACR2BQ8N4Y2 399 aaPredicted RBP8.75□□□□□ -1.01
TCF4-266ENST00000628689 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 FTOQ9C0B1 505 aaKnown RBP eCLIP8.75□□□□□ -1.01
TCF4-266ENST00000628689 CTNNA3Q9UI47 895 aa8.75□□□□□ -1.01
TCF4-266ENST00000628689 CABYRO75952 493 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 PSMC6P62333 389 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 ACVR2BQ13705 512 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 CTC1Q2NKJ3 1217 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 CCDC144BQ3MJ40 725 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 RABL6Q3YEC7 729 aaPredicted RBP8.74□□□□□ -1.01
TCF4-266ENST00000628689 TIGD5Q53EQ6 642 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 SPTY2D1Q68D10 685 aaPredicted RBP8.74□□□□□ -1.01
TCF4-266ENST00000628689 RPAINQ86UA6 219 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 MSL3Q8N5Y2 521 aaKnown RBP8.74□□□□□ -1.01
TCF4-266ENST00000628689 MB21D1Q8N884 522 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 SH3RF3Q8TEJ3 882 aaPredicted RBP8.74□□□□□ -1.01
TCF4-266ENST00000628689 RAD9AQ99638 391 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 C17orf80Q9BSJ5 609 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 BICC1Q9H694 974 aaKnown RBP8.74□□□□□ -1.01
TCF4-266ENST00000628689 TRMT13Q9NUP7 481 aaKnown RBP8.74□□□□□ -1.01
TCF4-266ENST00000628689 PALD1Q9ULE6 856 aa8.74□□□□□ -1.01
TCF4-266ENST00000628689 CNOT1A5YKK6 2376 aaKnown RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 LOC730098B7Z3J9 87 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 BAIAP3O94812 1187 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 SLC25A27O95847 323 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 NBPF7P0C2Y1 421 aaPredicted RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 IQCF3P0C7M6 154 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 RFC2P35250 354 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 KCNJ6P48051 423 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 WDR5P61964 334 aaKnown RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 DEFB103AP81534 67 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 CBX2Q14781 532 aaPredicted RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 TMEM132BQ14DG7 1078 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 RAB3GAP1Q15042 981 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 PTPROQ16827 1216 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 MAMDC4Q6UXC1 1216 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 ERICH6Q7L0X2 663 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 ZNF710Q8N1W2 664 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 ANKRD44Q8N8A2 993 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 TMEM105Q8N8V8 129 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 ATG4CQ96DT6 458 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 RIPOR3Q96MK2 946 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 SEZ6LQ9BYH1 1024 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 TRIM34Q9BYJ4 488 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 SIL1Q9H173 461 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 ALDH8A1Q9H2A2 487 aaPredicted RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 NSUN3Q9H649 340 aaKnown RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 SH2B1Q9NRF2 756 aaPredicted RBP8.73□□□□□ -1.01
TCF4-266ENST00000628689 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 ASTN1O14525 1302 aa8.73□□□□□ -1.01
TCF4-266ENST00000628689 EYA2O00167 538 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 NCK2O43639 380 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 GJB5O95377 273 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 LDHCP07864 332 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 CALD1Q05682 793 aaKnown RBP8.72□□□□□ -1.01
TCF4-266ENST00000628689 RASGRF1Q13972 1273 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 ATP2B3Q16720 1220 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 TWISTNBQ3B726 338 aaPredicted RBP8.72□□□□□ -1.01
TCF4-266ENST00000628689 CCDC102BQ68D86 513 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 MAPKAPK5Q8IW41 473 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 NSUN4Q96CB9 384 aaKnown RBP8.72□□□□□ -1.01
TCF4-266ENST00000628689 TANGO6Q9C0B7 1094 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 COL11A1P12107 1806 aaPredicted RBP8.72□□□□□ -1.01
TCF4-266ENST00000628689 TNKSO95271 1327 aa8.72□□□□□ -1.01
TCF4-266ENST00000628689 A0A1W2PRG0 241 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 SUPT20HL2P0C7V6 817 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 ADORA1P30542 326 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 GUCY1A2P33402 732 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 KIAA1755Q5JYT7 1200 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 TATDN1Q6P1N9 297 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 ATG9AQ7Z3C6 839 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 RIOX2Q8IUF8 465 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 TGFBRAP1Q8WUH2 860 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 TSR2Q969E8 191 aaKnown RBP8.71□□□□□ -1.02
TCF4-266ENST00000628689 ABHD16BQ9H3Z7 469 aa8.71□□□□□ -1.02
TCF4-266ENST00000628689 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.71□□□□□ -1.02
TCF4-266ENST00000628689 H3BNC9 293 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 DPYSL4O14531 572 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 TBX10O75333 385 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 ALDH1L1O75891 902 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 HOXB1P14653 301 aaPredicted RBP8.7□□□□□ -1.02
TCF4-266ENST00000628689 PTGS1P23219 599 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 GSTO1P78417 241 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 GPNMBQ14956 572 aa8.7□□□□□ -1.02
TCF4-266ENST00000628689 FSCN1Q16658 493 aaKnown RBP8.7□□□□□ -1.02
TCF4-266ENST00000628689 RSPO4Q2I0M5 234 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms