RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TNKSO95271 1327 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 SYNRGQ9UMZ2 1314 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
SSBP4-215ENST00000625926 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 MOXD2PA6NHM9 499 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 ACLYP53396 1101 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
SSBP4-215ENST00000625926 TRDNQ13061 729 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 KCNA10Q16322 511 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 ENAHQ8N8S7 591 aaPredicted RBP12.69□□□□□ -0.38
SSBP4-215ENST00000625926 PCSK9Q8NBP7 692 aaKnown RBP12.69□□□□□ -0.38
SSBP4-215ENST00000625926 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
SSBP4-215ENST00000625926 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
SSBP4-215ENST00000625926 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 NFIBO00712 420 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 SGSM2O43147 1006 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 PARP1P09874 1014 aaKnown RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 C6orf222P0C671 652 aaPredicted RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 CST5P28325 142 aaPredicted RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 GJA9P57773 515 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 TNFAIP2Q03169 654 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 PTH1RQ03431 593 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 TLE2Q04725 743 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 CLEC4DQ8WXI8 215 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 PRDM5Q9NQX1 630 aaPredicted RBP12.68□□□□□ -0.38
SSBP4-215ENST00000625926 STARD7Q9NQZ5 370 aa12.68□□□□□ -0.38
SSBP4-215ENST00000625926 ASTN1O14525 1302 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 ADCY6O43306 1168 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 CYP21A2P08686 494 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
SSBP4-215ENST00000625926 GNASQ5JWF2 1037 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 IQSEC1Q6DN90 963 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 RNF207Q6ZRF8 634 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 EEPD1Q7L9B9 569 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 MORC4Q8TE76 937 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 UPF3AQ9H1J1 476 aaKnown RBP12.67□□□□□ -0.38
SSBP4-215ENST00000625926 CPVLQ9H3G5 476 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 VTA1Q9NP79 307 aa12.67□□□□□ -0.38
SSBP4-215ENST00000625926 ELP1O95163 1332 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 VCANP13611 3396 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 MYADML2A6NDP7 307 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 DHX16O60231 1041 aaKnown RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 ASGR1P07306 291 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 SMPD1P17405 629 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 CALML3P27482 149 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 NKX3-2P78367 333 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 CDC37Q16543 378 aaPredicted RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 USH1GQ495M9 461 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 TAPT1Q6NXT6 567 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 KIAA1211Q6ZU35 1233 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 ADGRF4Q8IZF3 695 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 RGS22Q8NE09 1264 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 MAP4K1Q92918 833 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 MPHOSPH6Q99547 160 aaKnown RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 MAF1Q9H063 256 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 AP5M1Q9H0R1 490 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 PDLIM7Q9NR12 457 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 GNEQ9Y223 722 aaKnown RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 Q9Y3F1 56 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 DDX49Q9Y6V7 483 aaKnown RBP12.66□□□□□ -0.38
SSBP4-215ENST00000625926 MYH8P13535 1937 aa12.66□□□□□ -0.38
SSBP4-215ENST00000625926 ERICH2A1L162 156 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 TRIM43BA6NCK2 446 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 DCDC2CA8MYV0 355 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 B4DLN1 442 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 E7EWF7 191 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 DYNC1LI2O43237 492 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 PQBP1O60828 265 aaKnown RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 CLTBP09497 229 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 MRPL12P52815 198 aaKnown RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 RPS6P62753 249 aaKnown RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 SEC23AQ15436 765 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 SLC30A10Q6XR72 485 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 SH3RF1Q7Z6J0 888 aa12.65□□□□□ -0.38
SSBP4-215ENST00000625926 FBXO16Q8IX29 292 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-215ENST00000625926 NCOA7Q8NI08 942 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms