RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 C1orf53Q5VUE5 145 aa18.76■□□□□ 0.59
DDB2-216ENST00000622878 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
DDB2-216ENST00000622878 RNF180Q86T96 592 aa18.76■□□□□ 0.59
DDB2-216ENST00000622878 KLHDC9Q8NEP7 349 aa18.76■□□□□ 0.59
DDB2-216ENST00000622878 CLEC4DQ8WXI8 215 aa18.76■□□□□ 0.59
DDB2-216ENST00000622878 TNKSO95271 1327 aa18.75■□□□□ 0.59
DDB2-216ENST00000622878 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
DDB2-216ENST00000622878 MORC4Q8TE76 937 aa18.75■□□□□ 0.59
DDB2-216ENST00000622878 FERMT2Q96AC1 680 aa18.75■□□□□ 0.59
DDB2-216ENST00000622878 PURBQ96QR8 312 aaKnown RBP18.75■□□□□ 0.59
DDB2-216ENST00000622878 KAT14Q9H8E8 782 aa18.75■□□□□ 0.59
DDB2-216ENST00000622878 WDR19Q8NEZ3 1342 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 LTBP2Q14767 1821 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 ASB14A6NK59 587 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 NFIBO00712 420 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 SEC23AQ15436 765 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 CYB5R4Q7L1T6 521 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 TSEN34Q9BSV6 310 aaKnown RBP18.74■□□□□ 0.59
DDB2-216ENST00000622878 UPF3AQ9H1J1 476 aaKnown RBP18.74■□□□□ 0.59
DDB2-216ENST00000622878 CPVLQ9H3G5 476 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 PNMA2Q9UL42 364 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 TAF6LQ9Y6J9 622 aa18.74■□□□□ 0.59
DDB2-216ENST00000622878 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
DDB2-216ENST00000622878 A0A1W2PQ45 241 aaPredicted RBP18.73■□□□□ 0.59
DDB2-216ENST00000622878 A0A1W2PQY0 241 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 MYADML2A6NDP7 307 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 CST5P28325 142 aaPredicted RBP18.73■□□□□ 0.59
DDB2-216ENST00000622878 NKX3-2P78367 333 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 IRX5P78411 483 aaPredicted RBP18.73■□□□□ 0.59
DDB2-216ENST00000622878 BAATQ14032 418 aaPredicted RBP18.73■□□□□ 0.59
DDB2-216ENST00000622878 TRIM60Q495X7 471 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 NSMFQ6X4W1 530 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 MAP4K1Q92918 833 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 UBA5Q9GZZ9 404 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 ATP11BQ9Y2G3 1177 aa18.73■□□□□ 0.59
DDB2-216ENST00000622878 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
DDB2-216ENST00000622878 CTAGE5O15320 804 aa18.72■□□□□ 0.59
DDB2-216ENST00000622878 ACLYP53396 1101 aa18.72■□□□□ 0.59
DDB2-216ENST00000622878 GJA9P57773 515 aa18.72■□□□□ 0.59
DDB2-216ENST00000622878 UBAC1Q9BSL1 405 aa18.72■□□□□ 0.59
DDB2-216ENST00000622878 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.59
DDB2-216ENST00000622878 MOXD2PA6NHM9 499 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 KCNA10Q16322 511 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 ASPRV1Q53RT3 343 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 TAPT1Q6NXT6 567 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 SLC30A10Q6XR72 485 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 STOX1Q6ZVD7 989 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 ADGRF4Q8IZF3 695 aa18.71■□□□□ 0.59
DDB2-216ENST00000622878 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
DDB2-216ENST00000622878 MYH6P13533 1939 aa18.7■□□□□ 0.58
DDB2-216ENST00000622878 LOC102724159A0A0B4J2E5 919 aa18.7■□□□□ 0.58
DDB2-216ENST00000622878 E7EWF7 191 aa18.7■□□□□ 0.58
DDB2-216ENST00000622878 SOX1O00570 391 aaPredicted RBP18.7■□□□□ 0.58
DDB2-216ENST00000622878 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
DDB2-216ENST00000622878 PWP2Q15269 919 aaKnown RBP18.7■□□□□ 0.58
DDB2-216ENST00000622878 IFIT1BQ5T764 474 aaKnown RBP18.7■□□□□ 0.58
DDB2-216ENST00000622878 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
DDB2-216ENST00000622878 RGS22Q8NE09 1264 aa18.7■□□□□ 0.58
DDB2-216ENST00000622878 PDLIM7Q9NR12 457 aa18.7■□□□□ 0.58
DDB2-216ENST00000622878 ADD3Q9UEY8 706 aaKnown RBP18.7■□□□□ 0.58
DDB2-216ENST00000622878 PARP1P09874 1014 aaKnown RBP18.69■□□□□ 0.58
DDB2-216ENST00000622878 C6orf222P0C671 652 aaPredicted RBP18.69■□□□□ 0.58
DDB2-216ENST00000622878 ALDH5A1P51649 535 aaPredicted RBP18.69■□□□□ 0.58
DDB2-216ENST00000622878 RPS6P62753 249 aaKnown RBP18.69■□□□□ 0.58
DDB2-216ENST00000622878 TNFAIP2Q03169 654 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 TLE2Q04725 743 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 TRDNQ13061 729 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 CDC37Q16543 378 aaPredicted RBP18.69■□□□□ 0.58
DDB2-216ENST00000622878 RNF207Q6ZRF8 634 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 TDHQ8IZJ6 230 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 STAG2Q8N3U4 1231 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 UBE2OQ9C0C9 1292 aaKnown RBP18.69■□□□□ 0.58
DDB2-216ENST00000622878 JMJD4Q9H9V9 463 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 VTA1Q9NP79 307 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 PDGFCQ9NRA1 345 aa18.69■□□□□ 0.58
DDB2-216ENST00000622878 PTPDC1A2A3K4 754 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 ASGR1P07306 291 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 SMPD1P17405 629 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 TMEM63BQ5T3F8 832 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 IQSEC1Q6DN90 963 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 SH3RF1Q7Z6J0 888 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 FBXO16Q8IX29 292 aaPredicted RBP18.68■□□□□ 0.58
DDB2-216ENST00000622878 PCSK9Q8NBP7 692 aaKnown RBP18.68■□□□□ 0.58
DDB2-216ENST00000622878 LSG1Q9H089 658 aaKnown RBP18.68■□□□□ 0.58
DDB2-216ENST00000622878 SENP2Q9HC62 589 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 MAD2L2Q9UI95 211 aa18.68■□□□□ 0.58
DDB2-216ENST00000622878 RBM8AQ9Y5S9 174 aaKnown RBP18.68■□□□□ 0.58
DDB2-216ENST00000622878 TRIM43BA6NCK2 446 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 PALM3A6NDB9 673 aaPredicted RBP18.67■□□□□ 0.58
DDB2-216ENST00000622878 PTGS1P23219 599 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 EDNRBP24530 442 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 CALML3P27482 149 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 QRICH1Q2TAL8 776 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 LRIT3Q3SXY7 679 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 USH1GQ495M9 461 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 EEPD1Q7L9B9 569 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 ANKRD33Q7Z3H0 272 aa18.67■□□□□ 0.58
DDB2-216ENST00000622878 NCOA7Q8NI08 942 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms