RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 FAM196BA6NMK8 535 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 TMEM110-MUSTN1A8MSY1 372 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 CCDC172P0C7W6 258 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 CCZ1BP86790 482 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 CCZ1P86791 482 aaPredicted RBP14.72□□□□□ -0.05
SIRPA-204ENST00000622179 SELENOOQ9BVL4 669 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 BAZ2BQ9UIF8 2168 aaKnown RBP14.72□□□□□ -0.05
SIRPA-204ENST00000622179 RGPD8O14715 1765 aaPredicted RBP14.72□□□□□ -0.05
SIRPA-204ENST00000622179 GPSM2P81274 684 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 AK8Q96MA6 479 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 COL5A2P05997 1499 aaPredicted RBP14.72□□□□□ -0.05
SIRPA-204ENST00000622179 AKAP12Q02952 1782 aa14.72□□□□□ -0.05
SIRPA-204ENST00000622179 ORC4O43929 436 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 TUBB2AQ13885 445 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 LRP10Q7Z4F1 713 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 ADGRA1Q86SQ6 560 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 IL17RAQ96F46 866 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 TUBB2BQ9BVA1 445 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 WTIPA6NIX2 430 aaPredicted RBP14.71□□□□□ -0.05
SIRPA-204ENST00000622179 PRCPP42785 496 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 DLGAP5Q15398 846 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 PTPROQ16827 1216 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 TCP11X2Q5H9J9 407 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 FBXO38Q6PIJ6 1188 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 FBXO11Q86XK2 927 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.05
SIRPA-204ENST00000622179 FRMD4BQ9Y2L6 1034 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 ASIC2Q16515 512 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.05
SIRPA-204ENST00000622179 NOX5Q96PH1 765 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 PHF20Q9BVI0 1012 aa14.71□□□□□ -0.05
SIRPA-204ENST00000622179 EEF1GP26641 437 aaKnown RBP14.71□□□□□ -0.06
SIRPA-204ENST00000622179 OAS2P29728 719 aaKnown RBP14.71□□□□□ -0.06
SIRPA-204ENST00000622179 VAV2P52735 878 aa14.71□□□□□ -0.06
SIRPA-204ENST00000622179 SNAP25P60880 206 aa14.71□□□□□ -0.06
SIRPA-204ENST00000622179 GPATCH4Q5T3I0 446 aaKnown RBP14.71□□□□□ -0.06
SIRPA-204ENST00000622179 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.06
SIRPA-204ENST00000622179 SFMBT2Q5VUG0 894 aa14.71□□□□□ -0.06
SIRPA-204ENST00000622179 LSM14BQ9BX40 385 aaKnown RBP14.71□□□□□ -0.06
SIRPA-204ENST00000622179 HAUS4Q9H6D7 363 aa14.71□□□□□ -0.06
SIRPA-204ENST00000622179 TUBE1Q9UJT0 475 aa14.71□□□□□ -0.06
SIRPA-204ENST00000622179 DCCP43146 1447 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 TUBBP07437 444 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 E4F1Q66K89 784 aaPredicted RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 DHTKD1Q96HY7 919 aaPredicted RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 PHLPP2Q6ZVD8 1323 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 CLRN2A0PK11 232 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 PTPAQ15257 358 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 KIAA0753Q2KHM9 967 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 ABCB5Q2M3G0 1257 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 RBM43Q6ZSC3 357 aaKnown RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 TMEM260Q9NX78 707 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 CDC23Q9UJX2 597 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 ARHGEF35A5YM69 484 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 BUB1O43683 1085 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 UBXN2AP68543 259 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 CYP27A1Q02318 531 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 SMC1AQ14683 1233 aaKnown RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 PPP4R3AQ6IN85 833 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 CUEDC2Q9H467 287 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 RSPH14Q9UHP6 348 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 POTEMA6NI47 508 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 MYCLP12524 364 aaPredicted RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 POLR2FP61218 127 aaKnown RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 ATP2C1P98194 919 aaPredicted RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
SIRPA-204ENST00000622179 FBXO33Q7Z6M2 555 aa14.7□□□□□ -0.06
SIRPA-204ENST00000622179 KNDC1Q76NI1 1749 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 MFAP3LO75121 409 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 ADAM9Q13443 819 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 MTF1Q14872 753 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 TXNRD1Q16881 649 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
SIRPA-204ENST00000622179 TCRBV5S4A2TA0A5A2 114 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 MEIS1O00470 390 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 CALUO43852 315 aaPredicted RBP14.69□□□□□ -0.06
SIRPA-204ENST00000622179 PPARDQ03181 441 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 C8orf74Q6P047 294 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 C3orf67Q6ZVT6 689 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 RGS22Q8NE09 1264 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 KDM3AQ9Y4C1 1321 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 CCNE1P24864 410 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 RDXP35241 583 aaKnown RBP14.69□□□□□ -0.06
SIRPA-204ENST00000622179 NTRK3Q16288 839 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 LMBR1Q8WVP7 490 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 CCDC17Q96LX7 622 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 PANX2Q96RD6 677 aa14.69□□□□□ -0.06
SIRPA-204ENST00000622179 TROAPQ12815 778 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 GRM4Q14833 912 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 SMCR8Q8TEV9 937 aaPredicted RBP14.68□□□□□ -0.06
SIRPA-204ENST00000622179 CSRNP1Q96S65 589 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 SH3GLB2Q9NR46 395 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 GSTTP1A0A1W2PQM5 241 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 GAS7O60861 476 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 NSMFQ6X4W1 530 aa14.68□□□□□ -0.06
SIRPA-204ENST00000622179 KRT27Q7Z3Y8 459 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms