RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 NBPF11Q86T75 865 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 DEFB123Q8N688 67 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 AGBL3Q8NEM8 1001 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 GMLQ99445 158 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 SMG9Q9H0W8 520 aaKnown RBP6.36□□□□□ -1.39
SRSF4-207ENST00000622143 FRRS1LQ9P0K9 344 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 PCDHAC2Q9Y5I4 1007 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 CEP290O15078 2479 aa6.36□□□□□ -1.39
SRSF4-207ENST00000622143 A0A0C4DFX4 3053 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 CLRN2A0PK11 232 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
SRSF4-207ENST00000622143 NEFLP07196 543 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 HYAL2Q12891 473 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 TRIM28Q13263 835 aaKnown RBP6.35□□□□□ -1.39
SRSF4-207ENST00000622143 TAF1CQ15572 869 aaPredicted RBP6.35□□□□□ -1.39
SRSF4-207ENST00000622143 TMC4Q7Z404 712 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 LRP10Q7Z4F1 713 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 KIAA0825Q8IV33 1275 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 RGS22Q8NE09 1264 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 PRO3102Q9H379 93 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 ZFYVE28Q9HCC9 887 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 CUL9Q8IWT3 2517 aa6.35□□□□□ -1.39
SRSF4-207ENST00000622143 AOX1Q06278 1338 aa6.34□□□□□ -1.39
SRSF4-207ENST00000622143 F8W031 263 aaPredicted RBP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 ACPPP15309 386 aa6.34□□□□□ -1.39
SRSF4-207ENST00000622143 ERCC3P19447 782 aa6.34□□□□□ -1.39
SRSF4-207ENST00000622143 RPS8P62241 208 aaKnown RBP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 ENOX2Q16206 610 aaKnown RBP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 GDF6Q6KF10 455 aaPredicted RBP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 NCAPG2Q86XI2 1143 aa6.34□□□□□ -1.39
SRSF4-207ENST00000622143 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 VEZTQ9HBM0 779 aa6.34□□□□□ -1.39
SRSF4-207ENST00000622143 ZMYND8Q9ULU4 1186 aaPredicted RBP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 RANBP2P49792 3224 aaKnown RBP6.34□□□□□ -1.39
SRSF4-207ENST00000622143 PSME4Q14997 1843 aa6.34□□□□□ -1.4
SRSF4-207ENST00000622143 A0A0A0MRY4 1105 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 CCL15-CCL14A0A0B4J2E2 113 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 IRS4O14654 1257 aaPredicted RBP6.33□□□□□ -1.4
SRSF4-207ENST00000622143 FARP2O94887 1054 aaPredicted RBP6.33□□□□□ -1.4
SRSF4-207ENST00000622143 ZBTB48P10074 688 aaPredicted RBP6.33□□□□□ -1.4
SRSF4-207ENST00000622143 KLRK1P26718 216 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 RAC1P63000 192 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 CCL15Q16663 113 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 KRT24Q2M2I5 525 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 HSP90AB3PQ58FF7 597 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 DACT2Q5SW24 774 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 NBPF12Q5TAG4 269 aaPredicted RBP6.33□□□□□ -1.4
SRSF4-207ENST00000622143 OTUD7BQ6GQQ9 843 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 FAM43AQ8N2R8 423 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 BRI3BPQ8WY22 251 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 TTC9Q92623 222 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 PLD4Q96BZ4 506 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 OPTNQ96CV9 577 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 FAM161BQ96MY7 647 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 HTATIP2Q9BUP3 242 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 DEFB129Q9H1M3 183 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 DNAJC25Q9H1X3 360 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 NPHS2Q9NP85 383 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 LATS2Q9NRM7 1088 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 TSPYL4Q9UJ04 414 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 ZNF646O15015 1829 aaPredicted RBP6.33□□□□□ -1.4
SRSF4-207ENST00000622143 SPEF2Q9C093 1822 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 OTOFQ9HC10 1997 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 DLG5Q8TDM6 1919 aa6.33□□□□□ -1.4
SRSF4-207ENST00000622143 IGSF3O75054 1194 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 KIF4AO95239 1232 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 LDHBP07195 334 aaKnown RBP6.32□□□□□ -1.4
SRSF4-207ENST00000622143 CCL5P13501 91 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 SYN1P17600 705 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 CTGFP29279 349 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 INHBEP58166 350 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 ATP11AP98196 1134 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 ATP2B2Q01814 1243 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 COL19A1Q14993 1142 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
SRSF4-207ENST00000622143 GRIK4Q16099 956 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 FBXO33Q7Z6M2 555 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 TXNRD3Q86VQ6 643 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 WFDC8Q8IUA0 241 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 APOBEC3FQ8IUX4 373 aaKnown RBP6.32□□□□□ -1.4
SRSF4-207ENST00000622143 DMRTC2Q8IXT2 367 aaPredicted RBP6.32□□□□□ -1.4
SRSF4-207ENST00000622143 C7orf61Q8IZ16 206 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 FOXD4L4Q8WXT5 416 aaPredicted RBP6.32□□□□□ -1.4
SRSF4-207ENST00000622143 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 CCDC74AQ96AQ1 378 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 CFAP53Q96M91 514 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 RNF208Q9H0X6 261 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 MTMR10Q9NXD2 777 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 SALL4Q9UJQ4 1053 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 STXBP5LQ9Y2K9 1186 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 NR2E3Q9Y5X4 410 aa6.32□□□□□ -1.4
SRSF4-207ENST00000622143 UNC80Q8N2C7 3258 aa6.31□□□□□ -1.4
SRSF4-207ENST00000622143 USP2O75604 605 aaPredicted RBP6.31□□□□□ -1.4
SRSF4-207ENST00000622143 FURINP09958 794 aa6.31□□□□□ -1.4
SRSF4-207ENST00000622143 EDN3P14138 238 aa6.31□□□□□ -1.4
SRSF4-207ENST00000622143 SELPP16109 830 aa6.31□□□□□ -1.4
SRSF4-207ENST00000622143 ITGB7P26010 798 aa6.31□□□□□ -1.4
SRSF4-207ENST00000622143 IREB2P48200 963 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms