RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 CCNA1P78396 465 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 NOM1Q5C9Z4 860 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 SNX21Q969T3 373 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 SEC63Q9UGP8 760 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 ABCB11O95342 1321 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 K7ELQ4 463 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 SCG2P13521 617 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 FOSBP53539 338 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 PLEKHH3Q7Z736 793 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 CCAR1Q8IX12 1150 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 MROH8Q9H579 483 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 GJB4Q9NTQ9 266 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 GABRQQ9UN88 632 aa12.63□□□□□ -0.39
POLR2J3-221ENST00000621093 STXBP3O00186 592 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 ADAMTS3O15072 1205 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 CDKL5O76039 1030 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 PTPREP23469 700 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 MAPK4P31152 587 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 FCGRTP55899 365 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 AKAP17AQ02040 695 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 CUL4AQ13619 759 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 KIF22Q14807 665 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 TKFCQ3LXA3 575 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 TRIM22Q8IYM9 498 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 SMARCC2Q8TAQ2 1214 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 PURBQ96QR8 312 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 MMP19Q99542 508 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 ACAD9Q9H845 621 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 CEP350Q5VT06 3117 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
POLR2J3-221ENST00000621093 DEXIO95424 95 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 PGK2P07205 417 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 NAPAP54920 295 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 MORN1Q5T089 497 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 SLC30A10Q6XR72 485 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 A1CFQ9NQ94 594 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 MRPL11Q9Y3B7 192 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-221ENST00000621093 MYH7BA7E2Y1 1941 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 COBLO75128 1261 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 CFBP00751 764 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 FCER1AP12319 257 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 ADORA2AP29274 412 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 COPB2P35606 906 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 CNTN2Q02246 1040 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 PRKCZQ05513 592 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 BAATQ14032 418 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 GRB14Q14449 540 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 OTOP1Q7RTM1 612 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 COL20A1Q9P218 1284 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 TRIM17Q9Y577 477 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
POLR2J3-221ENST00000621093 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 CYP2B6P20813 491 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 CALML3P27482 149 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 GJB2P29033 226 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 HOXA13P31271 388 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 KCTD2Q14681 263 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 UBE2SQ16763 222 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 USP17L6PQ6QN14 398 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 RNF207Q6ZRF8 634 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 USP6NLQ92738 828 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 FGD4Q96M96 766 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 CYP39A1Q9NYL5 469 aa12.59□□□□□ -0.39
POLR2J3-221ENST00000621093 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms