RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 CPVLQ9H3G5 476 aa18.13■□□□□ 0.49
RPP40-207ENST00000618533 A1CFQ9NQ94 594 aaKnown RBP18.13■□□□□ 0.49
RPP40-207ENST00000618533 NRBP1Q9UHY1 535 aa18.13■□□□□ 0.49
RPP40-207ENST00000618533 RPTORQ8N122 1335 aa18.13■□□□□ 0.49
RPP40-207ENST00000618533 ZBTB43O43298 467 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 CCL14Q16627 93 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 MICU3Q86XE3 530 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 FBXO11Q86XK2 927 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 RGS22Q8NE09 1264 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
RPP40-207ENST00000618533 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
RPP40-207ENST00000618533 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 KLF18A0A0U1RQI7 1052 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 PGK2P07205 417 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 GJB1P08034 283 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 CCL5P13501 91 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 PRKAR2AP13861 404 aaKnown RBP18.11■□□□□ 0.49
RPP40-207ENST00000618533 EVCP57679 992 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
RPP40-207ENST00000618533 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 RNF208Q9H0X6 261 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 MRPL11Q9Y3B7 192 aaKnown RBP18.11■□□□□ 0.49
RPP40-207ENST00000618533 NID2Q14112 1375 aa18.11■□□□□ 0.49
RPP40-207ENST00000618533 SYNGAP1Q96PV0 1343 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 PNMA6FA0A0J9YX94 578 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 POTEB2H3BUK9 544 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 CYTH3O43739 400 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 CPA1P15085 419 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 MTFR1Q15390 333 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 RTN1Q16799 776 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 MAMDC4Q6UXC1 1216 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 MCF2L2Q86YR7 1114 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 SAMD3Q8N6K7 520 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 FAM133AQ8N9E0 248 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 CLEC4DQ8WXI8 215 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 BRF1Q92994 677 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
RPP40-207ENST00000618533 TINF2Q9BSI4 451 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 PAK6Q9NQU5 681 aaPredicted RBP18.1■□□□□ 0.49
RPP40-207ENST00000618533 MAP3K20Q9NYL2 800 aaKnown RBP18.1■□□□□ 0.49
RPP40-207ENST00000618533 CYP39A1Q9NYL5 469 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 FLRT1Q9NZU1 646 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 SEC63Q9UGP8 760 aaKnown RBP18.1■□□□□ 0.49
RPP40-207ENST00000618533 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
RPP40-207ENST00000618533 CACNB2Q08289 660 aaPredicted RBP18.09■□□□□ 0.49
RPP40-207ENST00000618533 USH1GQ495M9 461 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 NSMFQ6X4W1 530 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 RNF207Q6ZRF8 634 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 TMTC3Q6ZXV5 915 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 PIGSQ96S52 555 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPP40-207ENST00000618533 UNC93B1Q9H1C4 597 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 ALDH8A1Q9H2A2 487 aaPredicted RBP18.09■□□□□ 0.49
RPP40-207ENST00000618533 ADD3Q9UEY8 706 aaKnown RBP18.09■□□□□ 0.49
RPP40-207ENST00000618533 LCTP09848 1927 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 CENPFP49454 3210 aa18.09■□□□□ 0.49
RPP40-207ENST00000618533 GOLGA8AA7E2F4 631 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 NFIBO00712 420 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 MSCO60682 206 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 SEC24BO95487 1268 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 RXRAP19793 462 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 HOMER1Q86YM7 354 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 MCM3APO60318 1980 aa18.08■□□□□ 0.48
RPP40-207ENST00000618533 ASB14A6NK59 587 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 CAPN15O75808 1086 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 PLEKHA8P1O95397 391 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 CYBAP13498 195 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 CYP2C19P33261 490 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 GJA8P48165 433 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 METAP2P50579 478 aaKnown RBP eCLIP18.07■□□□□ 0.48
RPP40-207ENST00000618533 GHRHRQ02643 423 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 APOBRQ0VD83 1088 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 TRIM32Q13049 653 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 BAATQ14032 418 aaPredicted RBP18.07■□□□□ 0.48
RPP40-207ENST00000618533 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 CCDC144CPQ8IYA2 1237 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
RPP40-207ENST00000618533 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
RPP40-207ENST00000618533 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
RPP40-207ENST00000618533 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
RPP40-207ENST00000618533 PDRG1Q9NUG6 133 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 CNPY2Q9Y2B0 182 aa18.07■□□□□ 0.48
RPP40-207ENST00000618533 PTPDC1A2A3K4 754 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 B4DLN1 442 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 MYCP01106 439 aaPredicted RBP18.06■□□□□ 0.48
RPP40-207ENST00000618533 RGS19P49795 217 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 MRPL12P52815 198 aaKnown RBP18.06■□□□□ 0.48
RPP40-207ENST00000618533 SOX10P56693 466 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 RPS6P62753 249 aaKnown RBP18.06■□□□□ 0.48
RPP40-207ENST00000618533 TOB2Q14106 344 aaPredicted RBP18.06■□□□□ 0.48
RPP40-207ENST00000618533 DNERQ8NFT8 737 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
RPP40-207ENST00000618533 FGD4Q96M96 766 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 RBM27Q9P2N5 1060 aaKnown RBP18.06■□□□□ 0.48
RPP40-207ENST00000618533 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms