RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 STMN4Q9H169 189 aaPredicted RBP8.12□□□□□ -1.11
PDE6A-205ENST00000617647 PPP1R9AQ9ULJ8 1098 aa8.12□□□□□ -1.11
PDE6A-205ENST00000617647 KIF1BO60333 1816 aa8.12□□□□□ -1.11
PDE6A-205ENST00000617647 PTPRTO14522 1441 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SHPRHQ149N8 1683 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ZSCAN9O15535 394 aaPredicted RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 HNRNPRO43390 633 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ALDH1L1O75891 902 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 LINGO3P0C6S8 592 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 XRCC4Q13426 336 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 NCAPHQ15003 741 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 EZH2Q15910 746 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 TSHZ1Q6ZSZ6 1077 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 G2E3Q7L622 706 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SPICE1Q8N0Z3 855 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ANKRD13CQ8N6S4 541 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ATP11CQ8NB49 1132 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 UHMK1Q8TAS1 419 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 LRRC8CQ8TDW0 803 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MCUR1Q96AQ8 359 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ACSBG1Q96GR2 724 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ALG1Q9BT22 464 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 DMGDHQ9UI17 866 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 KLF18A0A0U1RQI7 1052 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MGRN1O60291 552 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 UBTFL6P0CB48 400 aaPredicted RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 GSTT1P30711 240 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 RASSF2P50749 326 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ZMYM1Q5SVZ6 1142 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 PHLDB3Q6NSJ2 640 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SLC17A8Q8NDX2 589 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 TRIM47Q96LD4 638 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ZNF570Q96NI8 536 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 NEUROD6Q96NK8 337 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 PLEKHF1Q96S99 279 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 OSBPL7Q9BZF2 842 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MIS12Q9H081 205 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 CNOT10Q9H9A5 744 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SPATA7Q9P0W8 599 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 STOML1Q9UBI4 398 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SLC4A7Q9Y6M7 1214 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 AGPSO00116 658 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MAP3K7O43318 606 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ALDH5A1P51649 535 aaPredicted RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 CYP27A1Q02318 531 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 RBM26Q5T8P6 1007 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SULT6B1Q6IMI4 303 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 ST13P4Q8IZP2 240 aaPredicted RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 TSEN2Q8NCE0 465 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SMC1BQ8NDV3 1235 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 TBC1D5Q92609 795 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 LTV1Q96GA3 475 aaPredicted RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MPHOSPH6Q99547 160 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 IFIH1Q9BYX4 1025 aaKnown RBP8.11□□□□□ -1.11
PDE6A-205ENST00000617647 SERTAD1Q9UHV2 236 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 MAPK8IP1Q9UQF2 711 aa8.11□□□□□ -1.11
PDE6A-205ENST00000617647 PTCH1Q13635 1447 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 STAT6P42226 847 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 BIRC3Q13489 604 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 DHX32Q7L7V1 743 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 APBB1IPQ7Z5R6 666 aaPredicted RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 SPATA4Q8NEY3 305 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 RAPGEF5Q92565 580 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 RBM17Q96I25 401 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 NLRP3Q96P20 1036 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 NACA2Q9H009 215 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ANKIB1Q9P2G1 1089 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 INO80Q9ULG1 1556 aaPredicted RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 NVLO15381 856 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 BAG2O95816 211 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 GHRP10912 638 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 TMED10P49755 219 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 PLCD1P51178 756 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 CACNA2D1P54289 1103 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ZNF449Q6P9G9 518 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 TRIM50Q86XT4 487 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 FAM133AQ8N9E0 248 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 PHC3Q8NDX5 983 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 RAB3IL1Q8TBN0 382 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ENOX1Q8TC92 643 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 WDR60Q8WVS4 1066 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 SPATA17Q96L03 361 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 RAB17Q9H0T7 212 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ZWILCHQ9H900 591 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ABHD10Q9NUJ1 306 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 SMARCAL1Q9NZC9 954 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 TFR2Q9UP52 801 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 GSTA2P09210 222 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ZCCHC18P0CG32 403 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 DMPKQ09013 629 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 SPATA1Q5VX52 437 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms