RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TSPY2A6NKD2 308 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 ADCY6O43306 1168 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 ORC4O43929 436 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 ZBED4O75132 1171 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 CST5P28325 142 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-218ENST00000616865 KCNA10Q16322 511 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 NCOA7Q8NI08 942 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 FGD4Q96M96 766 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 SLC38A10Q9HBR0 1119 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 INCENPQ9NQS7 918 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-218ENST00000616865 CLIP2Q9UDT6 1046 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 SYNPO2Q9UMS6 1093 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
UBXN1-218ENST00000616865 B4E1Z4 1266 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 TSPY3P0CV98 308 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 TSPY8P0CW00 308 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 PSMA5P28066 241 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 ACVR2BQ13705 512 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 RASEFQ8IZ41 740 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 ANKRD35Q8N283 1001 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 GLT1D1Q96MS3 346 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
UBXN1-218ENST00000616865 ABHD16BQ9H3Z7 469 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 RAVER2Q9HCJ3 691 aaKnown RBP17.38■□□□□ 0.37
UBXN1-218ENST00000616865 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 TBX21Q9UL17 535 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBXN1-218ENST00000616865 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
UBXN1-218ENST00000616865 ELP1O95163 1332 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 NEDD4P46934 1319 aa17.38■□□□□ 0.37
UBXN1-218ENST00000616865 TIMP1P01033 207 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 ASGR1P07306 291 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 C6orf222P0C671 652 aaPredicted RBP17.37■□□□□ 0.37
UBXN1-218ENST00000616865 DNAJB2P25686 324 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 NT5C2P49902 561 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 OAZ1P54368 228 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 ANAPC15P60006 121 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 IRX5P78411 483 aaPredicted RBP17.37■□□□□ 0.37
UBXN1-218ENST00000616865 TFAP4Q01664 338 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
UBXN1-218ENST00000616865 PCSK9Q8NBP7 692 aaKnown RBP17.37■□□□□ 0.37
UBXN1-218ENST00000616865 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 CHST13Q8NET6 341 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 KCNB2Q92953 911 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 MKL1Q969V6 931 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 UPF3AQ9H1J1 476 aaKnown RBP17.37■□□□□ 0.37
UBXN1-218ENST00000616865 MTMR4Q9NYA4 1195 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 FEM1BQ9UK73 627 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 TAF6LQ9Y6J9 622 aa17.37■□□□□ 0.37
UBXN1-218ENST00000616865 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-218ENST00000616865 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-218ENST00000616865 KDM4AO75164 1064 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 TTLL1O95922 423 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
UBXN1-218ENST00000616865 CCDC144BQ3MJ40 725 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 ARMCX2Q7L311 632 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■□□□ 11.9
UBXN1-218ENST00000616865 SPC25Q9HBM1 224 aa17.36■□□□□ 0.37
UBXN1-218ENST00000616865 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
UBXN1-218ENST00000616865 FGRP09769 529 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 CASTP20810 708 aaKnown RBP17.35■□□□□ 0.37
UBXN1-218ENST00000616865 MCM5P33992 734 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 CDK7P50613 346 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 GJA9P57773 515 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 GRIN2CQ14957 1233 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 SART3Q15020 963 aaKnown RBP17.35■□□□□ 0.37
UBXN1-218ENST00000616865 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 CCDC144CPQ8IYA2 1237 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 UBAC1Q9BSL1 405 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 KATNBL1Q9H079 304 aa17.35■□□□□ 0.37
UBXN1-218ENST00000616865 ERICH2A1L162 156 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 BMP3P12645 472 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
UBXN1-218ENST00000616865 FGD1P98174 961 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBXN1-218ENST00000616865 ADCK5Q3MIX3 580 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 CCDC178Q5BJE1 867 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 PPP4R3BQ5MIZ7 849 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 SLFN13Q68D06 897 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 TBC1D32Q96NH3 1257 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
UBXN1-218ENST00000616865 ARVCFO00192 962 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 FDX1P10109 184 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 STAT2P52630 851 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 NKX3-2P78367 333 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 GNASQ5JWF2 1037 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 CCDC174Q6PII3 467 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 FAM126BQ8IXS8 530 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms