RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 MAP3K14Q99558 947 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 APBA2Q99767 749 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 COBLO75128 1261 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 RXRAP19793 462 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 GSE1Q14687 1217 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 CCL14Q16627 93 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 NPLOC4Q8TAT6 608 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 MMP19Q99542 508 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
CCL3L3-201ENST00000612839 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 CYTH3O43739 400 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 ALAS1P13196 640 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 KCTD2Q14681 263 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 Q6ZUG5 572 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 DPP9Q86TI2 863 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 MTMR8Q96EF0 704 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
CCL3L3-201ENST00000612839 DNAJC25-GNG10A0A024R161 153 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 IGHA2P01877 340 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 INHAP05111 366 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 PGK2P07205 417 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 CALM1P0DP23 149 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 CALM2P0DP24 149 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 CALM3P0DP25 149 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 ANAPC15P60006 121 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 TRIM32Q13049 653 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 QRICH1Q2TAL8 776 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 RIOX1Q9H6W3 641 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 RBBP6Q7Z6E9 1792 aaKnown RBP13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 LCTP09848 1927 aa13.17□□□□□ -0.3
CCL3L3-201ENST00000612839 ST18O60284 1047 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 MYCP01106 439 aaPredicted RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 HMGCRP04035 888 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 KIF5BP33176 963 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 FGD1P98174 961 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 MTFR1Q15390 333 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 TRMT44Q8IYL2 757 aaKnown RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 BRF1Q92994 677 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 NFIBO00712 420 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 ZBTB43O43298 467 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 PLEKHA8P1O95397 391 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 UBXN2AP68543 259 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 ZNF792Q3KQV3 632 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 USH1GQ495M9 461 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 MAP3K21Q5TCX8 1036 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 SRBD1Q8N5C6 995 aaKnown RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 MAML3Q96JK9 1138 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 PIGSQ96S52 555 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
CCL3L3-201ENST00000612839 ZBTB5O15062 677 aa13.15□□□□□ -0.3
CCL3L3-201ENST00000612839 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
CCL3L3-201ENST00000612839 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
CCL3L3-201ENST00000612839 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
CCL3L3-201ENST00000612839 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms