RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.892e-9■■■■□ 21.3
TMCO1-208ENST00000612311 KLHL7Q8IXQ5 586 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 MSANTD4Q8NCY6 345 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 P2RX5Q93086 422 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 COA7Q96BR5 231 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 SELENOSQ9BQE4 189 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 NSRP1Q9H0G5 558 aaKnown RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 GOLPH3LQ9H4A5 285 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 KANSL2Q9H9L4 492 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 MYL1P05976 194 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 GCFC2P16383 781 aaKnown RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 STRN3Q13033 797 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ADAM9Q13443 819 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 MIER3Q7Z3K6 550 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 FAM178BQ8IXR5 827 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 AFAP1L1Q8TED9 768 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 PAGE5Q96GU1 130 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 LARSQ9P2J5 1176 aaKnown RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ZNF609O15014 1411 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 COL15A1P39059 1388 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ALAS1P13196 640 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 SLC16A2P36021 539 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 CDK8P49336 464 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 RCAN1P53805 252 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 NCBP1Q09161 790 aaKnown RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 NLRX1Q86UT6 975 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 PLA2G4DQ86XP0 818 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ENAHQ8N8S7 591 aaPredicted RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 METTL14Q9HCE5 456 aaKnown RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 CPDO75976 1380 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 GOLGA6BA6NDN3 693 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 KIF4AO95239 1232 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 RFX5P48382 616 aaPredicted RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 CYP2J2P51589 502 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 PAK2Q13177 524 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 TNFAIP1Q13829 316 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 KCTD1Q719H9 257 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 VWDEQ8N2E2 1590 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 UBL4BQ8N7F7 174 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 LRRC45Q96CN5 670 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 GPR101Q96P66 508 aaPredicted RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 IWS1Q96ST2 819 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 DBNDD1Q9H9R9 158 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 STK17AQ9UEE5 414 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 UTYO14607 1347 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 hCG_1984214I3L0E3 225 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 OAS2P29728 719 aaKnown RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 POLR2FP61218 127 aaKnown RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 RBL2Q08999 1139 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 TMED8Q6PL24 325 aaPredicted RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 CPLX4Q7Z7G2 160 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 SYCE1Q8N0S2 351 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 ZNF713Q8N859 430 aaPredicted RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 PAIP2Q9BPZ3 127 aaKnown RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 TRIM31Q9BZY9 425 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 DCP1AQ9NPI6 582 aaPredicted RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 CDC23Q9UJX2 597 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 TCP1P17987 556 aaKnown RBP9.49□□□□□ -0.89
TMCO1-208ENST00000612311 GBP6Q6ZN66 633 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 SPICE1Q8N0Z3 855 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 ANKRD13CQ8N6S4 541 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 CCDC114Q96M63 670 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 HYOU1Q9Y4L1 999 aa9.49□□□□□ -0.89
TMCO1-208ENST00000612311 GOLGA6CA6NDK9 693 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 GOLGA6DP0CG33 693 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 CCNE1P24864 410 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 FKBP3Q00688 224 aaKnown RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 PABPC4Q13310 644 aaKnown RBP eCLIP9.48□□□□□ -0.895e-9■■■■□ 24.5
TMCO1-208ENST00000612311 SLC35F6Q8N357 371 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 GDAP1L1Q96MZ0 367 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 GOLGA6AQ9NYA3 693 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 RWDD2AQ9UIY3 292 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 DIP2AQ14689 1571 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 CSF1RP07333 972 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 DAAM2Q86T65 1068 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 OTUD6BQ8N6M0 293 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 U2AF1L4Q8WU68 220 aaKnown RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 GJA10Q969M2 543 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 UTP11Q9Y3A2 253 aaKnown RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 NEURL4Q96JN8 1562 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 UBN2Q6ZU65 1347 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 PLCG1P19174 1290 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 TBC1D9BQ66K14 1250 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 OXER1Q8TDS5 423 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 RABGGTAQ92696 567 aa9.48□□□□□ -0.89
TMCO1-208ENST00000612311 IQCGQ9H095 443 aaKnown RBP9.48□□□□□ -0.89
TMCO1-208ENST00000612311 FRMPD1Q5SYB0 1578 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms