RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 DDX11Q96FC9 970 aa10.15□□□□□ -0.78
SNCA-212ENST00000611107 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
SNCA-212ENST00000611107 ACAD9Q9H845 621 aa10.15□□□□□ -0.78
SNCA-212ENST00000611107 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
SNCA-212ENST00000611107 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 ADAMTS4O75173 837 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 HSPA4P34932 840 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 BAATQ14032 418 aaPredicted RBP10.14□□□□□ -0.79
SNCA-212ENST00000611107 HABP4Q5JVS0 413 aaKnown RBP10.14□□□□□ -0.79
SNCA-212ENST00000611107 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 KCNB2Q92953 911 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 FERMT2Q96AC1 680 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 MYL10Q9BUA6 226 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 LRRC2Q9BYS8 371 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 CNNM2Q9H8M5 875 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 JMJD4Q9H9V9 463 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 COL20A1Q9P218 1284 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
SNCA-212ENST00000611107 MAD2L2Q9UI95 211 aa10.14□□□□□ -0.79
SNCA-212ENST00000611107 CTDP1Q9Y5B0 961 aaPredicted RBP10.14□□□□□ -0.79
SNCA-212ENST00000611107 LAMA3Q16787 3333 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 SZT2Q5T011 3432 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 SYNRGQ9UMZ2 1314 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SNCA-212ENST00000611107 CYTH3O43739 400 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 EVI5O60447 810 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 SEC24BO95487 1268 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
SNCA-212ENST00000611107 COPB2P35606 906 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 NT5C2P49902 561 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 CDC37Q16543 378 aaPredicted RBP10.13□□□□□ -0.79
SNCA-212ENST00000611107 QRICH1Q2TAL8 776 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 ADCK5Q3MIX3 580 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 USH1GQ495M9 461 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 CCSAPQ6IQ19 270 aaPredicted RBP10.13□□□□□ -0.79
SNCA-212ENST00000611107 TAPT1Q6NXT6 567 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 TCEANC2Q96MN5 208 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 HTATIP2Q9BUP3 242 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 USP26Q9BXU7 913 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 KRT23Q9C075 422 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 KAT14Q9H8E8 782 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 VAT1LQ9HCJ6 419 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
SNCA-212ENST00000611107 KIAA1217Q5T5P2 1943 aa10.13□□□□□ -0.79
SNCA-212ENST00000611107 SYNGAP1Q96PV0 1343 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 MYH7BA7E2Y1 1941 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
SNCA-212ENST00000611107 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
SNCA-212ENST00000611107 FDX1P10109 184 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 TROAPQ12815 778 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 TKFCQ3LXA3 575 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 CCDC144BQ3MJ40 725 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 IFIT1BQ5T764 474 aaKnown RBP10.12□□□□□ -0.79
SNCA-212ENST00000611107 RNF20Q5VTR2 975 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 SH3RF1Q7Z6J0 888 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
SNCA-212ENST00000611107 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
SNCA-212ENST00000611107 IQCA1Q86XH1 822 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 FBXO16Q8IX29 292 aaPredicted RBP10.12□□□□□ -0.79
SNCA-212ENST00000611107 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 MTMR8Q96EF0 704 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 XPNPEP3Q9NQH7 507 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 SLC5A4Q9NY91 659 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 SNX14Q9Y5W7 946 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
SNCA-212ENST00000611107 DNM1LO00429 736 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 SOX1O00570 391 aaPredicted RBP10.11□□□□□ -0.79
SNCA-212ENST00000611107 CPA1P15085 419 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 SMPD1P17405 629 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 RXRAP19793 462 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 ITGB8P26012 769 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 CALML3P27482 149 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
SNCA-212ENST00000611107 RTP1P59025 263 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 RPS6P62753 249 aaKnown RBP10.11□□□□□ -0.79
SNCA-212ENST00000611107 BEX3Q00994 111 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 TRDNQ13061 729 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 GRM4Q14833 912 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 TSGA10IPQ3SY00 556 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 TRIM60Q495X7 471 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 SLC39A5Q6ZMH5 540 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 MORC4Q8TE76 937 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 PPP1R13LQ8WUF5 828 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 TAAR1Q96RJ0 339 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 GDF15Q99988 308 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 UBAC1Q9BSL1 405 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 PHF24Q9UPV7 400 aa10.11□□□□□ -0.79
SNCA-212ENST00000611107 GNEQ9Y223 722 aaKnown RBP10.11□□□□□ -0.79
SNCA-212ENST00000611107 WDR19Q8NEZ3 1342 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms