RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 DIS3LQ8TF46 1054 aaKnown RBP14.9□□□□□ -0.02
CD9-212ENST00000610354 PURBQ96QR8 312 aaKnown RBP14.9□□□□□ -0.02
CD9-212ENST00000610354 TINF2Q9BSI4 451 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 ALPK3Q96L96 1907 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 ERICH2A1L162 156 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 KLRF2D3W0D1 207 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 ZNF865P0CJ78 1059 aaPredicted RBP14.89□□□□□ -0.03
CD9-212ENST00000610354 MCM5P33992 734 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 HSPA4P34932 840 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 CDC37Q16543 378 aaPredicted RBP14.89□□□□□ -0.03
CD9-212ENST00000610354 QRICH1Q2TAL8 776 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 MAMDC4Q6UXC1 1216 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 MTMR8Q96EF0 704 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 MTA3Q9BTC8 594 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 MYL10Q9BUA6 226 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 VAT1LQ9HCJ6 419 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 CYP39A1Q9NYL5 469 aa14.89□□□□□ -0.03
CD9-212ENST00000610354 DDX49Q9Y6V7 483 aaKnown RBP14.89□□□□□ -0.03
CD9-212ENST00000610354 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 CYTH3O43739 400 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 PPP1R11O60927 126 aaPredicted RBP14.88□□□□□ -0.03
CD9-212ENST00000610354 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
CD9-212ENST00000610354 CNGA1P29973 690 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 SART3Q15020 963 aaKnown RBP14.88□□□□□ -0.03
CD9-212ENST00000610354 RNF20Q5VTR2 975 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
CD9-212ENST00000610354 TBC1D5Q92609 795 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 TMEM87BQ96K49 555 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 TCEANC2Q96MN5 208 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 NEK1Q96PY6 1258 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 DDX20Q9UHI6 824 aaKnown RBP14.88□□□□□ -0.03
CD9-212ENST00000610354 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
CD9-212ENST00000610354 POTEB2H3BUK9 544 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 CPA1P15085 419 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 BAATQ14032 418 aaPredicted RBP14.87□□□□□ -0.03
CD9-212ENST00000610354 ANO1Q5XXA6 986 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 ZNF654Q8IZM8 581 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 PAWRQ96IZ0 340 aaKnown RBP14.87□□□□□ -0.03
CD9-212ENST00000610354 KATNBL1Q9H079 304 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 RIOX1Q9H6W3 641 aa14.87□□□□□ -0.03
CD9-212ENST00000610354 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 CAPN2P17655 700 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 LIFRP42702 1097 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 USH1GQ495M9 461 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 SLC30A10Q6XR72 485 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 CATIPQ7Z7H3 387 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 RAB11FIP4Q86YS3 637 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 MSL3Q8N5Y2 521 aaKnown RBP14.86□□□□□ -0.03
CD9-212ENST00000610354 ANKLE1Q8NAG6 615 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 NRBP1Q9UHY1 535 aa14.86□□□□□ -0.03
CD9-212ENST00000610354 PFASO15067 1338 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 SYNGAP1Q96PV0 1343 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 SEPT4O43236 478 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 RXRAP19793 462 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 ARMCX2Q7L311 632 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 DHX32Q7L7V1 743 aaKnown RBP14.85□□□□□ -0.03
CD9-212ENST00000610354 CCDC144CPQ8IYA2 1237 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 NUP133Q8WUM0 1156 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 LENG1Q96BZ8 264 aaPredicted RBP14.85□□□□□ -0.03
CD9-212ENST00000610354 PIGSQ96S52 555 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 MAP3K14Q99558 947 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
CD9-212ENST00000610354 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
CD9-212ENST00000610354 OPLAHO14841 1288 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 ADCY6O43306 1168 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
CD9-212ENST00000610354 DDAH1O94760 285 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 REC8O95072 547 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 COL6A1P12109 1028 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 SGMS1Q86VZ5 419 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 FBXO11Q86XK2 927 aa14.84□□□□□ -0.03
CD9-212ENST00000610354 ABCB11O95342 1321 aa14.83□□□□□ -0.03
CD9-212ENST00000610354 CCDC69A6NI79 296 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 ZBTB5O15062 677 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 MSCO60682 206 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 PLEKHA8P1O95397 391 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 RPS6P62753 249 aaKnown RBP14.83□□□□□ -0.04
CD9-212ENST00000610354 ACVR2BQ13705 512 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 KRT32Q14532 448 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 NFXL1Q6ZNB6 911 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 RNF207Q6ZRF8 634 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
CD9-212ENST00000610354 TMTC2Q8N394 836 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 SRBD1Q8N5C6 995 aaKnown RBP14.83□□□□□ -0.04
CD9-212ENST00000610354 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 MORC4Q8TE76 937 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 JAKMIP1Q96N16 626 aaKnown RBP14.83□□□□□ -0.04
CD9-212ENST00000610354 COL20A1Q9P218 1284 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 PNMA2Q9UL42 364 aa14.83□□□□□ -0.04
CD9-212ENST00000610354 CEP290O15078 2479 aa14.82□□□□□ -0.04
CD9-212ENST00000610354 PTPDC1A2A3K4 754 aa14.82□□□□□ -0.04
CD9-212ENST00000610354 EPB41L2O43491 1005 aaKnown RBP14.82□□□□□ -0.04
CD9-212ENST00000610354 CALML3P27482 149 aa14.82□□□□□ -0.04
CD9-212ENST00000610354 ALDH5A1P51649 535 aaPredicted RBP14.82□□□□□ -0.04
CD9-212ENST00000610354 IRX5P78411 483 aaPredicted RBP14.82□□□□□ -0.04
CD9-212ENST00000610354 GJC2Q5T442 439 aaPredicted RBP14.82□□□□□ -0.04
CD9-212ENST00000610354 NECAB2Q7Z6G3 386 aa14.82□□□□□ -0.04
CD9-212ENST00000610354 HOMER1Q86YM7 354 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms