RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 RPS6KA4O75676 772 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CYP19A1P11511 503 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 DNM2P50570 870 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 TOB1P50616 345 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CELF1Q92879 486 aaKnown RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 PANX2Q96RD6 677 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 TMEM110-MUSTN1A8MSY1 372 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 LIG3P49916 1009 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CACNB3P54284 484 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 TCP11X2Q5H9J9 407 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 USP17L2Q6R6M4 530 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 ABHD10Q9NUJ1 306 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 FHOD1Q9Y613 1164 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 OPA1O60313 960 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CCT5P48643 541 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 RASSF7Q02833 373 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 KRT26Q7Z3Y9 468 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CNKSR1Q969H4 720 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 ZNF446Q9NWS9 450 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CPDO75976 1380 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 GOLGA6L7A0A1B0GV03 622 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 TRIM66O15016 1216 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 ACTN2P35609 894 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 CNNM4Q6P4Q7 775 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 STAG1Q8WVM7 1258 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 AGXT2Q9BYV1 514 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 KANSL2Q9H9L4 492 aa11.51□□□□□ -0.57
CTCFL-216ENST00000608263 RRP15Q9Y3B9 282 aaKnown RBP11.51□□□□□ -0.57
CTCFL-216ENST00000608263 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 MOCS3O95396 460 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 ZNF658Q5TYW1 1059 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 OTUD6BQ8N6M0 293 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 BCAS4Q8TDM0 211 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 DYDC1Q8WWB3 177 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 PRPF3O43395 683 aaKnown RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 CEP104O60308 925 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 TNIP1Q15025 636 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 CALCRLQ16602 461 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 ADAT2Q7Z6V5 191 aaKnown RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 REXO1Q8N1G1 1221 aaKnown RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 HGSO14964 777 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 PLCG1P19174 1290 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 GNGT1P63211 74 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 MECOMQ03112 1051 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 UBLCP1Q8WVY7 318 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-216ENST00000608263 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
CTCFL-216ENST00000608263 SPATA31D1Q6ZQQ2 1576 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 ZNF185O15231 689 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 TUBBP07437 444 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 CHRNA5P30532 468 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 USH1GQ495M9 461 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 VTI1AQ96AJ9 217 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 KDM6AO15550 1401 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 OR52Z1P0C646 297 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 H2AFXP16104 143 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 NR1I3Q14994 352 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 TMTC3Q6ZXV5 915 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 SRBD1Q8N5C6 995 aaKnown RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 CTNNBL1Q8WYA6 563 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 COA7Q96BR5 231 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 MAP3K14Q99558 947 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 WTIPA6NIX2 430 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 PPP1R12BO60237 982 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 POLR2FP61218 127 aaKnown RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 TUBB2AQ13885 445 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 EARS2Q5JPH6 523 aaKnown RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 TRIM65Q6PJ69 517 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 NOX5Q96PH1 765 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 TUBB2BQ9BVA1 445 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-216ENST00000608263 HPSEQ9Y251 543 aa11.49□□□□□ -0.57
CTCFL-216ENST00000608263 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 MYO1CO00159 1063 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 CHMP2AO43633 222 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 TBC1D8O95759 1140 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
CTCFL-216ENST00000608263 KRT13P13646 458 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 BMP6P22004 513 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 TUBB4BP68371 445 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-216ENST00000608263 EHHADHQ08426 723 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 MAEAQ7L5Y9 396 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 SYCP3Q8IZU3 236 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 ADD3Q9UEY8 706 aaKnown RBP11.48□□□□□ -0.57
CTCFL-216ENST00000608263 RWDD2AQ9UIY3 292 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTCFL-216ENST00000608263 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
CTCFL-216ENST00000608263 ACTN4O43707 911 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms