RNA–Protein interactions for RNA: ENST00000607942.5

CCDC116-203, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC116, Length 1,913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-203ENST00000607942 USP17L22D6RA61 530 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 USP17L17D6RBQ6 530 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 USP17L19D6RCP7 530 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 USP17L20D6RJB6 530 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 EDIL3O43854 480 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 CLK2P49760 499 aaKnown RBP18.68■□□□□ 0.58
CCDC116-203ENST00000607942 USP17L24Q0WX57 530 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 POSTNQ15063 836 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 USP17L6PQ6QN14 398 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
CCDC116-203ENST00000607942 GPC2Q8N158 579 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 AMNQ9BXJ7 453 aa18.68■□□□□ 0.58
CCDC116-203ENST00000607942 LONP1P36776 959 aaKnown RBP18.67■□□□□ 0.58
CCDC116-203ENST00000607942 ELOA2Q8IYF1 753 aaPredicted RBP18.67■□□□□ 0.58
CCDC116-203ENST00000607942 ZNF341Q9BYN7 854 aa18.67■□□□□ 0.58
CCDC116-203ENST00000607942 HOOK1Q9UJC3 728 aaKnown RBP18.67■□□□□ 0.58
CCDC116-203ENST00000607942 PP2D1A8MPX8 630 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 NEMFO60524 1076 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 OR52Z1P0C646 297 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 AFMP43652 599 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 STAT2P52630 851 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 DHX40Q8IX18 779 aaKnown RBP18.66■□□□□ 0.58
CCDC116-203ENST00000607942 AOPEPQ8N6M6 819 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 FEZ1Q99689 392 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 SYT17Q9BSW7 474 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 SH2D4AQ9H788 454 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 LAD1O00515 517 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 TDP2O95551 362 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 SLFN14P0C7P3 912 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 INPP5BP32019 993 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 KIFC2Q96AC6 838 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 PAGE5Q96GU1 130 aa18.66■□□□□ 0.58
CCDC116-203ENST00000607942 NAT10Q9H0A0 1025 aaKnown RBP18.66■□□□□ 0.58
CCDC116-203ENST00000607942 DDNO94850 711 aaPredicted RBP18.65■□□□□ 0.58
CCDC116-203ENST00000607942 PRPHP41219 470 aa18.65■□□□□ 0.58
CCDC116-203ENST00000607942 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
CCDC116-203ENST00000607942 KANK3Q6NY19 840 aa18.65■□□□□ 0.58
CCDC116-203ENST00000607942 RNF181Q9P0P0 153 aa18.65■□□□□ 0.58
CCDC116-203ENST00000607942 FZD1Q9UP38 647 aa18.65■□□□□ 0.58
CCDC116-203ENST00000607942 BECN2A8MW95 431 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 GOLGA6L19H0YKK7 550 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 SLC37A4O43826 429 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 YBX3P16989 372 aaKnown RBP eCLIP18.64■□□□□ 0.58
CCDC116-203ENST00000607942 CASP1P29466 404 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 KARSQ15046 597 aaKnown RBP18.64■□□□□ 0.58
CCDC116-203ENST00000607942 CCDC174Q6PII3 467 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 STAMQ92783 540 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 GGA3Q9NZ52 723 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 MAN1B1Q9UKM7 699 aa18.64■□□□□ 0.58
CCDC116-203ENST00000607942 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 CTNND1O60716 968 aaKnown RBP18.64■□□□□ 0.57
CCDC116-203ENST00000607942 E2F4Q16254 413 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 SH3RF1Q7Z6J0 888 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 APOBEC3FQ8IUX4 373 aaKnown RBP18.64■□□□□ 0.57
CCDC116-203ENST00000607942 CHURC1Q8WUH1 139 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 SMARCE1Q969G3 411 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 GLT8D2Q9H1C3 349 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 FBXO28Q9NVF7 368 aa18.64■□□□□ 0.57
CCDC116-203ENST00000607942 DICER1Q9UPY3 1922 aaKnown RBP18.64■□□□□ 0.57
CCDC116-203ENST00000607942 MEIS2O14770 477 aa18.63■□□□□ 0.57
CCDC116-203ENST00000607942 TXLNAP40222 546 aa18.63■□□□□ 0.57
CCDC116-203ENST00000607942 DGKZQ13574 1117 aa18.63■□□□□ 0.57
CCDC116-203ENST00000607942 IQUBQ8NA54 791 aa18.63■□□□□ 0.57
CCDC116-203ENST00000607942 SBF1O95248 1867 aa18.63■□□□□ 0.57
CCDC116-203ENST00000607942 BMP6P22004 513 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 TECP42680 631 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 TXKP42681 527 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 CALCRLQ16602 461 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 DCAF15Q66K64 600 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 PLIN2Q99541 437 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 P2RX7Q99572 595 aaKnown RBP18.62■□□□□ 0.57
CCDC116-203ENST00000607942 ANO3Q9BYT9 981 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
CCDC116-203ENST00000607942 SARSP49591 514 aaKnown RBP18.62■□□□□ 0.57
CCDC116-203ENST00000607942 ORC2Q13416 577 aaPredicted RBP18.62■□□□□ 0.57
CCDC116-203ENST00000607942 PDXDC2PQ6P474 469 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 MTMR9Q96QG7 549 aa18.62■□□□□ 0.57
CCDC116-203ENST00000607942 OPLAHO14841 1288 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 UBA7P41226 1012 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 NT5DC1Q5TFE4 455 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 RASSF8Q8NHQ8 419 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
CCDC116-203ENST00000607942 CCDC34Q96HJ3 373 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 BPIFA3Q9BQP9 254 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
CCDC116-203ENST00000607942 FEM1BQ9UK73 627 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 HOXA13P31271 388 aaPredicted RBP18.61■□□□□ 0.57
CCDC116-203ENST00000607942 STAT6P42226 847 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 FAM160B2Q86V87 743 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 TRIM5Q9C035 493 aa18.61■□□□□ 0.57
CCDC116-203ENST00000607942 SMC2O95347 1197 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 MORC3Q14149 939 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 C9orf131Q5VYM1 1079 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 RRAGBQ5VZM2 374 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 PPP4R3AQ6IN85 833 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 CABP7Q86V35 215 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 UIMC1Q96RL1 719 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
CCDC116-203ENST00000607942 MTRQ99707 1265 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms