RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 BMP2KLQ5H9B9 411 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 IFIT1BQ5T764 474 aaKnown RBP14.4□□□□□ -0.1
CTSA-210ENST00000606000 SLC30A10Q6XR72 485 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 STAG2Q8N3U4 1231 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 CLEC4DQ8WXI8 215 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 FERMT2Q96AC1 680 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 KATNBL1Q9H079 304 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 NRBP1Q9UHY1 535 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 SYNRGQ9UMZ2 1314 aa14.4□□□□□ -0.1
CTSA-210ENST00000606000 MYH6P13533 1939 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 RARBP10826 455 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 NT5C2P49902 561 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 ACVR2BQ13705 512 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 BAATQ14032 418 aaPredicted RBP14.39□□□□□ -0.11
CTSA-210ENST00000606000 CDC37Q16543 378 aaPredicted RBP14.39□□□□□ -0.11
CTSA-210ENST00000606000 CCDC178Q5BJE1 867 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 GPATCH4Q5T3I0 446 aaKnown RBP14.39□□□□□ -0.11
CTSA-210ENST00000606000 ADGRF4Q8IZF3 695 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 MSL3Q8N5Y2 521 aaKnown RBP14.39□□□□□ -0.11
CTSA-210ENST00000606000 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
CTSA-210ENST00000606000 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
CTSA-210ENST00000606000 LTBP2Q14767 1821 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.38□□□□□ -0.11
CTSA-210ENST00000606000 KBTBD13C9JR72 458 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 ADAMTS4O75173 837 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 ADCYAP1R1P41586 468 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 TRDNQ13061 729 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 CCDC144BQ3MJ40 725 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 ASPRV1Q53RT3 343 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 RALYLQ86SE5 291 aaKnown RBP14.38□□□□□ -0.11
CTSA-210ENST00000606000 MB21D2Q8IYB1 491 aaPredicted RBP14.38□□□□□ -0.11
CTSA-210ENST00000606000 ARRDC4Q8NCT1 418 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 PRO3102Q9H379 93 aa14.38□□□□□ -0.11
CTSA-210ENST00000606000 GPHNQ9NQX3 736 aaPredicted RBP14.38□□□□□ -0.11
CTSA-210ENST00000606000 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 IFIT3O14879 490 aaKnown RBP14.37□□□□□ -0.11
CTSA-210ENST00000606000 SLC27A2O14975 620 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 PARP1P09874 1014 aaKnown RBP14.37□□□□□ -0.11
CTSA-210ENST00000606000 CALML3P27482 149 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 RTP1P59025 263 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 TMEM63BQ5T3F8 832 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 EEPD1Q7L9B9 569 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 FBXO16Q8IX29 292 aaPredicted RBP14.37□□□□□ -0.11
CTSA-210ENST00000606000 ABHD16BQ9H3Z7 469 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 VAT1LQ9HCJ6 419 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 ANO2Q9NQ90 1003 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 PDGFCQ9NRA1 345 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 FAM184BQ9ULE4 1060 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 WDR19Q8NEZ3 1342 aa14.37□□□□□ -0.11
CTSA-210ENST00000606000 DHX16O60231 1041 aaKnown RBP14.36□□□□□ -0.11
CTSA-210ENST00000606000 ALDH5A1P51649 535 aaPredicted RBP14.36□□□□□ -0.11
CTSA-210ENST00000606000 QRICH1Q2TAL8 776 aa14.36□□□□□ -0.11
CTSA-210ENST00000606000 TRIM60Q495X7 471 aa14.36□□□□□ -0.11
CTSA-210ENST00000606000 KIAA1211Q6ZU35 1233 aa14.36□□□□□ -0.11
CTSA-210ENST00000606000 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
CTSA-210ENST00000606000 MAD2L2Q9UI95 211 aa14.36□□□□□ -0.11
CTSA-210ENST00000606000 A0A1W2PQ45 241 aaPredicted RBP14.35□□□□□ -0.11
CTSA-210ENST00000606000 A0A1W2PQY0 241 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 PPP1R11O60927 126 aaPredicted RBP14.35□□□□□ -0.11
CTSA-210ENST00000606000 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
CTSA-210ENST00000606000 GRM4Q14833 912 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 WTAPQ15007 396 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 NECTIN1Q15223 517 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 TMEM67Q5HYA8 995 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 SLC39A5Q6ZMH5 540 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 RNF207Q6ZRF8 634 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 MYL10Q9BUA6 226 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 PHF24Q9UPV7 400 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 ATP11BQ9Y2G3 1177 aa14.35□□□□□ -0.11
CTSA-210ENST00000606000 PALM3A6NDB9 673 aaPredicted RBP14.34□□□□□ -0.11
CTSA-210ENST00000606000 ASB14A6NK59 587 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 KLRF2D3W0D1 207 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 CTAGE5O15320 804 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
CTSA-210ENST00000606000 SLC34A2O95436 690 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 C6orf222P0C671 652 aaPredicted RBP14.34□□□□□ -0.11
CTSA-210ENST00000606000 MAGEA10P43363 369 aaPredicted RBP14.34□□□□□ -0.11
CTSA-210ENST00000606000 FXR1P51114 621 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTSA-210ENST00000606000 TAPT1Q6NXT6 567 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 RNF180Q86T96 592 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 KLHDC9Q8NEP7 349 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 IGDCC4Q8TDY8 1250 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 GDF15Q99988 308 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 COL20A1Q9P218 1284 aa14.34□□□□□ -0.11
CTSA-210ENST00000606000 ERICH2A1L162 156 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 PRC1O43663 620 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 CDC45O75419 566 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 SMPD1P17405 629 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 ACLYP53396 1101 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
CTSA-210ENST00000606000 BEX3Q00994 111 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 TNFAIP2Q03169 654 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 TROAPQ12815 778 aa14.33□□□□□ -0.12
CTSA-210ENST00000606000 SNX17Q15036 470 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms