RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SNAP25P60880 206 aa22.39■■□□□ 1.18
SRSF4-206ENST00000605204 IGDCC4Q8TDY8 1250 aa22.39■■□□□ 1.18
SRSF4-206ENST00000605204 CYP39A1Q9NYL5 469 aa22.39■■□□□ 1.18
SRSF4-206ENST00000605204 ASB14A6NK59 587 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 DDAH1O94760 285 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 LIFRP42702 1097 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 GRM4Q14833 912 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 CDC37Q16543 378 aaPredicted RBP22.38■■□□□ 1.17
SRSF4-206ENST00000605204 ADGRF4Q8IZF3 695 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 TRPV1Q8NER1 839 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 UBA5Q9GZZ9 404 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 PALM3A6NDB9 673 aaPredicted RBP22.38■■□□□ 1.17
SRSF4-206ENST00000605204 KLRF2D3W0D1 207 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 DHX16O60231 1041 aaKnown RBP22.38■■□□□ 1.17
SRSF4-206ENST00000605204 HMGB1P09429 215 aaKnown RBP22.38■■□□□ 1.17
SRSF4-206ENST00000605204 KIF5BP33176 963 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 TROAPQ12815 778 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 C7orf61Q8IZ16 206 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 ARRDC4Q8NCT1 418 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 ABHD16BQ9H3Z7 469 aa22.38■■□□□ 1.17
SRSF4-206ENST00000605204 ADD3Q9UEY8 706 aaKnown RBP22.38■■□□□ 1.17
SRSF4-206ENST00000605204 ABCB11O95342 1321 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 CALM1P0DP23 149 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 CALM2P0DP24 149 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 CALM3P0DP25 149 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 AKR1A1P14550 325 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 MUM1L1Q5H9M0 696 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 NSMFQ6X4W1 530 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 RGS22Q8NE09 1264 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 LRCH3Q96II8 777 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 NEK1Q96PY6 1258 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 LY9Q9HBG7 655 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 MAD2L2Q9UI95 211 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 DNAH12Q6ZR08 3092 aa22.37■■□□□ 1.17
SRSF4-206ENST00000605204 DNM1LO00429 736 aa22.36■■□□□ 1.17
SRSF4-206ENST00000605204 SH2B2O14492 632 aaPredicted RBP22.36■■□□□ 1.17
SRSF4-206ENST00000605204 RARBP10826 455 aa22.36■■□□□ 1.17
SRSF4-206ENST00000605204 CHST3Q7LGC8 479 aa22.36■■□□□ 1.17
SRSF4-206ENST00000605204 CTCFLQ8NI51 663 aaPredicted RBP22.36■■□□□ 1.17
SRSF4-206ENST00000605204 MPHOSPH6Q99547 160 aaKnown RBP22.36■■□□□ 1.17
SRSF4-206ENST00000605204 C11orf49Q9H6J7 331 aa22.36■■□□□ 1.17
SRSF4-206ENST00000605204 ZMYND8Q9ULU4 1186 aaPredicted RBP22.36■■□□□ 1.17
SRSF4-206ENST00000605204 CCDC69A6NI79 296 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 ARMCX2Q7L311 632 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 MCF2L2Q86YR7 1114 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 ZNF654Q8IZM8 581 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 CLEC4DQ8WXI8 215 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 FGD4Q96M96 766 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 LZTS2Q9BRK4 669 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 JMJD4Q9H9V9 463 aa22.35■■□□□ 1.17
SRSF4-206ENST00000605204 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.35■■□□□ 1.17
SRSF4-206ENST00000605204 B4DLN1 442 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 NFIBO00712 420 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 EIF5BO60841 1220 aaKnown RBP22.34■■□□□ 1.17
SRSF4-206ENST00000605204 SNAI1O95863 264 aaPredicted RBP22.34■■□□□ 1.17
SRSF4-206ENST00000605204 ZNF865P0CJ78 1059 aaPredicted RBP22.34■■□□□ 1.17
SRSF4-206ENST00000605204 SMARCA1P28370 1054 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 GNAQP50148 359 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 MRPL12P52815 198 aaKnown RBP22.34■■□□□ 1.17
SRSF4-206ENST00000605204 CNTN2Q02246 1040 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 QRICH1Q2TAL8 776 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 RNF207Q6ZRF8 634 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 FBXO11Q86XK2 927 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 STAG2Q8N3U4 1231 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 MTMR8Q96EF0 704 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 AMNQ9BXJ7 453 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 FAM184BQ9ULE4 1060 aa22.34■■□□□ 1.17
SRSF4-206ENST00000605204 MRPL11Q9Y3B7 192 aaKnown RBP22.34■■□□□ 1.17
SRSF4-206ENST00000605204 ZBTB5O15062 677 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 HSPA4P34932 840 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 ACVR2BQ13705 512 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 PRAMEF19Q5SWL8 479 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 DHX32Q7L7V1 743 aaKnown RBP22.33■■□□□ 1.17
SRSF4-206ENST00000605204 SGMS1Q86VZ5 419 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 CCDC144CPQ8IYA2 1237 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 KCNB2Q92953 911 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 CPVLQ9H3G5 476 aa22.33■■□□□ 1.17
SRSF4-206ENST00000605204 A0A1W2PPC1 479 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 PTPDC1A2A3K4 754 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 SOWAHBA6NEL2 793 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 KBTBD13C9JR72 458 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 COL6A1P12109 1028 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 BAATQ14032 418 aaPredicted RBP22.32■■□□□ 1.16
SRSF4-206ENST00000605204 USH1GQ495M9 461 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 SAMD3Q8N6K7 520 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 DNERQ8NFT8 737 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 RIOX1Q9H6W3 641 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 SENP2Q9HC62 589 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 ZHX1Q9UKY1 873 aaPredicted RBP22.32■■□□□ 1.16
SRSF4-206ENST00000605204 SLC12A7Q9Y666 1083 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 LAMA2P24043 3122 aaKnown RBP22.32■■□□□ 1.16
SRSF4-206ENST00000605204 PLXNA1Q9UIW2 1896 aa22.32■■□□□ 1.16
SRSF4-206ENST00000605204 SYNE3Q6ZMZ3 975 aa22.31■■□□□ 1.16
SRSF4-206ENST00000605204 RNF180Q86T96 592 aa22.31■■□□□ 1.16
SRSF4-206ENST00000605204 MORC4Q8TE76 937 aa22.31■■□□□ 1.16
SRSF4-206ENST00000605204 NUP133Q8WUM0 1156 aa22.31■■□□□ 1.16
SRSF4-206ENST00000605204 GDF15Q99988 308 aa22.31■■□□□ 1.16
SRSF4-206ENST00000605204 SPZ1Q9BXG8 430 aa22.31■■□□□ 1.16
SRSF4-206ENST00000605204 XPNPEP3Q9NQH7 507 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms