RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PDGFCQ9NRA1 345 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 SLC5A4Q9NY91 659 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 FBXO40Q9UH90 709 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 DNM1LO00429 736 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 SLC27A2O14975 620 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 CYTH3O43739 400 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 EVI5O60447 810 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 CAPN2P17655 700 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 ACVR2BQ13705 512 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 MTMR8Q96EF0 704 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 COL20A1Q9P218 1284 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 ZHX1Q9UKY1 873 aaPredicted RBP12.51□□□□□ -0.41
TUBE1-210ENST00000604967 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
TUBE1-210ENST00000604967 SYNRGQ9UMZ2 1314 aa12.51□□□□□ -0.41
TUBE1-210ENST00000604967 PALM3A6NDB9 673 aaPredicted RBP12.5□□□□□ -0.41
TUBE1-210ENST00000604967 MSCO60682 206 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 TROAPQ12815 778 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 TKFCQ3LXA3 575 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
TUBE1-210ENST00000604967 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 TAPT1Q6NXT6 567 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 MSL3Q8N5Y2 521 aaKnown RBP12.5□□□□□ -0.41
TUBE1-210ENST00000604967 KLHDC9Q8NEP7 349 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 MORC4Q8TE76 937 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 XPNPEP3Q9NQH7 507 aa12.5□□□□□ -0.41
TUBE1-210ENST00000604967 LAMA2P24043 3122 aaKnown RBP12.49□□□□□ -0.41
TUBE1-210ENST00000604967 WDR19Q8NEZ3 1342 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 AKR1A1P14550 325 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 FXR1P51114 621 aaKnown RBP eCLIP12.49□□□□□ -0.41
TUBE1-210ENST00000604967 SNX17Q15036 470 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 CDC37Q16543 378 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-210ENST00000604967 USH1GQ495M9 461 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
TUBE1-210ENST00000604967 FBXO16Q8IX29 292 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-210ENST00000604967 GDF15Q99988 308 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 MYL10Q9BUA6 226 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 PHF24Q9UPV7 400 aa12.49□□□□□ -0.41
TUBE1-210ENST00000604967 IFIT3O14879 490 aaKnown RBP12.48□□□□□ -0.41
TUBE1-210ENST00000604967 SLC34A2O95436 690 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
TUBE1-210ENST00000604967 PARP1P09874 1014 aaKnown RBP12.48□□□□□ -0.41
TUBE1-210ENST00000604967 RARBP10826 455 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 SMPD1P17405 629 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 ITGB8P26012 769 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 NT5C2P49902 561 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 RTP1P59025 263 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 RPS6P62753 249 aaKnown RBP12.48□□□□□ -0.41
TUBE1-210ENST00000604967 GRM4Q14833 912 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 ADCK5Q3MIX3 580 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 SLC39A5Q6ZMH5 540 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 EEPD1Q7L9B9 569 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 UBAC1Q9BSL1 405 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 UPF3AQ9H1J1 476 aaKnown RBP12.48□□□□□ -0.41
TUBE1-210ENST00000604967 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
TUBE1-210ENST00000604967 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
TUBE1-210ENST00000604967 A0A1W2PQ45 241 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-210ENST00000604967 A0A1W2PQY0 241 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 KLRF2D3W0D1 207 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-210ENST00000604967 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-210ENST00000604967 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
TUBE1-210ENST00000604967 EDNRBP24530 442 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 CALML3P27482 149 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 MAGEA10P43363 369 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-210ENST00000604967 ALDH5A1P51649 535 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-210ENST00000604967 BEX3Q00994 111 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 TRIM60Q495X7 471 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 TMEM67Q5HYA8 995 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 ABHD16BQ9H3Z7 469 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
TUBE1-210ENST00000604967 GRIN2DO15399 1336 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 TRIM43BA6NCK2 446 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms