RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ASB14A6NK59 587 aa19.2■□□□□ 0.66
TUBE1-206ENST00000603722 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
TUBE1-206ENST00000603722 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
TUBE1-206ENST00000603722 TDHQ8IZJ6 230 aa19.2■□□□□ 0.66
TUBE1-206ENST00000603722 ENAHQ8N8S7 591 aaPredicted RBP19.2■□□□□ 0.66
TUBE1-206ENST00000603722 KLHDC9Q8NEP7 349 aa19.2■□□□□ 0.66
TUBE1-206ENST00000603722 RUFY2Q8WXA3 655 aa19.2■□□□□ 0.66
TUBE1-206ENST00000603722 PURBQ96QR8 312 aaKnown RBP19.2■□□□□ 0.66
TUBE1-206ENST00000603722 LBHD1Q9BQE6 289 aaPredicted RBP19.2■□□□□ 0.66
TUBE1-206ENST00000603722 CPVLQ9H3G5 476 aa19.2■□□□□ 0.66
TUBE1-206ENST00000603722 CNNM2Q9H8M5 875 aa19.2■□□□□ 0.66
TUBE1-206ENST00000603722 C6orf222P0C671 652 aaPredicted RBP19.19■□□□□ 0.66
TUBE1-206ENST00000603722 ACLYP53396 1101 aa19.19■□□□□ 0.66
TUBE1-206ENST00000603722 BAATQ14032 418 aaPredicted RBP19.19■□□□□ 0.66
TUBE1-206ENST00000603722 C1orf53Q5VUE5 145 aa19.19■□□□□ 0.66
TUBE1-206ENST00000603722 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
TUBE1-206ENST00000603722 UBAC1Q9BSL1 405 aa19.19■□□□□ 0.66
TUBE1-206ENST00000603722 DNAH12Q6ZR08 3092 aa19.19■□□□□ 0.66
TUBE1-206ENST00000603722 TRIOBPQ9H2D6 2365 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.18■□□□□ 0.66
TUBE1-206ENST00000603722 PTPDC1A2A3K4 754 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 MOXD2PA6NHM9 499 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 PTH1RQ03431 593 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 TLE2Q04725 743 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 KCNA10Q16322 511 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 SLC30A10Q6XR72 485 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 FBXO16Q8IX29 292 aaPredicted RBP19.18■□□□□ 0.66
TUBE1-206ENST00000603722 CLEC4DQ8WXI8 215 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 ANKS1AQ92625 1134 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 TSEN34Q9BSV6 310 aaKnown RBP19.18■□□□□ 0.66
TUBE1-206ENST00000603722 UBA5Q9GZZ9 404 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 SPC25Q9HBM1 224 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 STARD7Q9NQZ5 370 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 WDR19Q8NEZ3 1342 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 LAMA4Q16363 1823 aa19.18■□□□□ 0.66
TUBE1-206ENST00000603722 PQBP1O60828 265 aaKnown RBP19.17■□□□□ 0.66
TUBE1-206ENST00000603722 CST5P28325 142 aaPredicted RBP19.17■□□□□ 0.66
TUBE1-206ENST00000603722 GJA9P57773 515 aa19.17■□□□□ 0.66
TUBE1-206ENST00000603722 TNFAIP2Q03169 654 aa19.17■□□□□ 0.66
TUBE1-206ENST00000603722 CCSAPQ6IQ19 270 aaPredicted RBP19.17■□□□□ 0.66
TUBE1-206ENST00000603722 NOL8Q76FK4 1167 aaKnown RBP19.17■□□□□ 0.66
TUBE1-206ENST00000603722 EEPD1Q7L9B9 569 aa19.17■□□□□ 0.66
TUBE1-206ENST00000603722 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
TUBE1-206ENST00000603722 UPF3AQ9H1J1 476 aaKnown RBP19.17■□□□□ 0.66
TUBE1-206ENST00000603722 PNMA2Q9UL42 364 aa19.17■□□□□ 0.66
TUBE1-206ENST00000603722 PLXNA1Q9UIW2 1896 aa19.17■□□□□ 0.66
TUBE1-206ENST00000603722 SGSM2O43147 1006 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 CYP21A2P08686 494 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 CALML3P27482 149 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 CDC37Q16543 378 aaPredicted RBP19.16■□□□□ 0.66
TUBE1-206ENST00000603722 USH1GQ495M9 461 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 ASPRV1Q53RT3 343 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 IFIT1BQ5T764 474 aaKnown RBP19.16■□□□□ 0.66
TUBE1-206ENST00000603722 CYB5R4Q7L1T6 521 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 SH3RF1Q7Z6J0 888 aa19.16■□□□□ 0.66
TUBE1-206ENST00000603722 ADD3Q9UEY8 706 aaKnown RBP19.16■□□□□ 0.66
TUBE1-206ENST00000603722 TRIM43BA6NCK2 446 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 ASGR1P07306 291 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 PTGS1P23219 599 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 ALDH5A1P51649 535 aaPredicted RBP19.15■□□□□ 0.66
TUBE1-206ENST00000603722 TRDNQ13061 729 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 RNF207Q6ZRF8 634 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 TLK2Q86UE8 772 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 PCSK9Q8NBP7 692 aaKnown RBP19.15■□□□□ 0.66
TUBE1-206ENST00000603722 TRIM43Q96BQ3 446 aaPredicted RBP19.15■□□□□ 0.66
TUBE1-206ENST00000603722 GLT1D1Q96MS3 346 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 PDGFCQ9NRA1 345 aa19.15■□□□□ 0.66
TUBE1-206ENST00000603722 U3KPZ7 1027 aaPredicted RBP19.15■□□□□ 0.66
TUBE1-206ENST00000603722 CTAGE5O15320 804 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 DHX16O60231 1041 aaKnown RBP19.14■□□□□ 0.65
TUBE1-206ENST00000603722 CLTBP09497 229 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 PARP1P09874 1014 aaKnown RBP19.14■□□□□ 0.65
TUBE1-206ENST00000603722 SMPD1P17405 629 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 RPS6P62753 249 aaKnown RBP19.14■□□□□ 0.65
TUBE1-206ENST00000603722 BEX3Q00994 111 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 LRIT3Q3SXY7 679 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 GNASQ5JWF2 1037 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 ADGRF4Q8IZF3 695 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 MORC4Q8TE76 937 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 BADQ92934 168 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 VTA1Q9NP79 307 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 GNEQ9Y223 722 aaKnown RBP19.14■□□□□ 0.65
TUBE1-206ENST00000603722 TAF6LQ9Y6J9 622 aa19.14■□□□□ 0.65
TUBE1-206ENST00000603722 SEC23AQ15436 765 aa19.13■□□□□ 0.65
TUBE1-206ENST00000603722 TMEM63BQ5T3F8 832 aa19.13■□□□□ 0.65
TUBE1-206ENST00000603722 TAPT1Q6NXT6 567 aa19.13■□□□□ 0.65
TUBE1-206ENST00000603722 ZNFX1Q9P2E3 1918 aaKnown RBP19.12■□□□□ 0.65
TUBE1-206ENST00000603722 ELP1O95163 1332 aa19.12■□□□□ 0.65
TUBE1-206ENST00000603722 KIAA1211Q6ZU35 1233 aa19.12■□□□□ 0.65
TUBE1-206ENST00000603722 ANKRD33Q7Z3H0 272 aa19.12■□□□□ 0.65
TUBE1-206ENST00000603722 RALYLQ86SE5 291 aaKnown RBP19.12■□□□□ 0.65
TUBE1-206ENST00000603722 VTI1AQ96AJ9 217 aa19.12■□□□□ 0.65
TUBE1-206ENST00000603722 AP5M1Q9H0R1 490 aa19.12■□□□□ 0.65
TUBE1-206ENST00000603722 VAT1LQ9HCJ6 419 aa19.12■□□□□ 0.65
TUBE1-206ENST00000603722 ABCB11O95342 1321 aa19.11■□□□□ 0.65
TUBE1-206ENST00000603722 E7EWF7 191 aa19.11■□□□□ 0.65
TUBE1-206ENST00000603722 DYNC1LI2O43237 492 aaPredicted RBP19.11■□□□□ 0.65
TUBE1-206ENST00000603722 ITGB8P26012 769 aa19.11■□□□□ 0.65
TUBE1-206ENST00000603722 NKX3-2P78367 333 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms