RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 ARMCX2Q7L311 632 aa27.68■■■□□ 2.02
SSX2IP-209ENST00000603677 SAMD3Q8N6K7 520 aa27.68■■■□□ 2.02
SSX2IP-209ENST00000603677 MORC4Q8TE76 937 aa27.68■■■□□ 2.02
SSX2IP-209ENST00000603677 FGD4Q96M96 766 aa27.68■■■□□ 2.02
SSX2IP-209ENST00000603677 ABCB11O95342 1321 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 B4DLN1 442 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 KBTBD13C9JR72 458 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 KLRF2D3W0D1 207 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 EPB41L2O43491 1005 aaKnown RBP27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 MRPL12P52815 198 aaKnown RBP27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 SNAP25P60880 206 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 TMEM67Q5HYA8 995 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 CATIPQ7Z7H3 387 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 RNF180Q86T96 592 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 UBA5Q9GZZ9 404 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 CEP290O15078 2479 aa27.67■■■□□ 2.02
SSX2IP-209ENST00000603677 DUSP11O75319 330 aaKnown RBP27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 SMARCA1P28370 1054 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 LIFRP42702 1097 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 TROAPQ12815 778 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 KRT32Q14532 448 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 GRM4Q14833 912 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 CDC37Q16543 378 aaPredicted RBP27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 NSMFQ6X4W1 530 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 MCF2L2Q86YR7 1114 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 CCDC144CPQ8IYA2 1237 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 DNERQ8NFT8 737 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 CLEC4DQ8WXI8 215 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 TSEN34Q9BSV6 310 aaKnown RBP27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 XPNPEP3Q9NQH7 507 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 MAP3K20Q9NYL2 800 aaKnown RBP27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 MAD2L2Q9UI95 211 aa27.66■■■□□ 2.02
SSX2IP-209ENST00000603677 SOWAHBA6NEL2 793 aa27.65■■■□□ 2.02
SSX2IP-209ENST00000603677 CNTN2Q02246 1040 aa27.65■■■□□ 2.02
SSX2IP-209ENST00000603677 RNF207Q6ZRF8 634 aa27.65■■■□□ 2.02
SSX2IP-209ENST00000603677 MTMR8Q96EF0 704 aa27.65■■■□□ 2.02
SSX2IP-209ENST00000603677 JMJD4Q9H9V9 463 aa27.65■■■□□ 2.02
SSX2IP-209ENST00000603677 TAF6LQ9Y6J9 622 aa27.65■■■□□ 2.02
SSX2IP-209ENST00000603677 DDAH1O94760 285 aa27.64■■■□□ 2.02
SSX2IP-209ENST00000603677 ANTXR2P58335 489 aa27.64■■■□□ 2.02
SSX2IP-209ENST00000603677 FBXO11Q86XK2 927 aa27.64■■■□□ 2.02
SSX2IP-209ENST00000603677 RIOX1Q9H6W3 641 aa27.64■■■□□ 2.02
SSX2IP-209ENST00000603677 MRPL11Q9Y3B7 192 aaKnown RBP27.64■■■□□ 2.02
SSX2IP-209ENST00000603677 MYH6P13533 1939 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 DHX16O60231 1041 aaKnown RBP27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 TAL1P17542 331 aaPredicted RBP27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 KIF5BP33176 963 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 BAATQ14032 418 aaPredicted RBP27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 LRRC41Q15345 812 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 SKAP1Q86WV1 359 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 LZTS2Q9BRK4 669 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 AMNQ9BXJ7 453 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 KATNBL1Q9H079 304 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 SPC25Q9HBM1 224 aa27.63■■■□□ 2.01
SSX2IP-209ENST00000603677 H0YGN5 161 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 NFIBO00712 420 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 ZBTB5O15062 677 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 PRC1O43663 620 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 HMGB1P09429 215 aaKnown RBP27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 CALM1P0DP23 149 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 CALM2P0DP24 149 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 CALM3P0DP25 149 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 GNAQP50148 359 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 NKX3-2P78367 333 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 C1orf53Q5VUE5 145 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 SENP6Q9GZR1 1112 aaPredicted RBP27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 LY9Q9HBG7 655 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 VTA1Q9NP79 307 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 ZHX1Q9UKY1 873 aaPredicted RBP27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 Q9Y3F1 56 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 MCM3APO60318 1980 aa27.62■■■□□ 2.01
SSX2IP-209ENST00000603677 PTPDC1A2A3K4 754 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 REC8O95072 547 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 CST5P28325 142 aaPredicted RBP27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 RPS6P62753 249 aaKnown RBP27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 QRICH1Q2TAL8 776 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 CCDC144BQ3MJ40 725 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 IQSEC1Q6DN90 963 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 STAG2Q8N3U4 1231 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 PHF24Q9UPV7 400 aa27.61■■■□□ 2.01
SSX2IP-209ENST00000603677 MOXD2PA6NHM9 499 aa27.6■■■□□ 2.01
SSX2IP-209ENST00000603677 ALDH5A1P51649 535 aaPredicted RBP27.6■■■□□ 2.01
SSX2IP-209ENST00000603677 GHRHRQ02643 423 aa27.6■■■□□ 2.01
SSX2IP-209ENST00000603677 NEK1Q96PY6 1258 aa27.6■■■□□ 2.01
SSX2IP-209ENST00000603677 ALPK3Q96L96 1907 aa27.6■■■□□ 2.01
SSX2IP-209ENST00000603677 ADAMTS4O75173 837 aa27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 USH1GQ495M9 461 aa27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 GJC2Q5T442 439 aaPredicted RBP27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 CHST3Q7LGC8 479 aa27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 SGMS1Q86VZ5 419 aa27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 PCSK9Q8NBP7 692 aaKnown RBP27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 CTCFLQ8NI51 663 aaPredicted RBP27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 UPF3AQ9H1J1 476 aaKnown RBP27.59■■■□□ 2.01
SSX2IP-209ENST00000603677 CCDC69A6NI79 296 aa27.58■■■□□ 2.01
SSX2IP-209ENST00000603677 SH2B2O14492 632 aaPredicted RBP27.58■■■□□ 2.01
SSX2IP-209ENST00000603677 GJA9P57773 515 aa27.58■■■□□ 2.01
SSX2IP-209ENST00000603677 ZNF654Q8IZM8 581 aa27.58■■■□□ 2.01
SSX2IP-209ENST00000603677 KLHDC9Q8NEP7 349 aa27.58■■■□□ 2.01
SSX2IP-209ENST00000603677 KCNB2Q92953 911 aa27.58■■■□□ 2.01
SSX2IP-209ENST00000603677 CPVLQ9H3G5 476 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms