RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 BAZ2BQ9UIF8 2168 aaKnown RBP17.83■□□□□ 0.45
TRIM47-206ENST00000592942 NFIBO00712 420 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 RPS6KB1P23443 525 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 GJA8P48165 433 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 CNTN2Q02246 1040 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 C8orf34Q49A92 452 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 PRAMEF19Q5SWL8 479 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 RAB11FIP4Q86YS3 637 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 SHISA4Q96DD7 197 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 PURBQ96QR8 312 aaKnown RBP17.83■□□□□ 0.44
TRIM47-206ENST00000592942 HMX1Q9NP08 348 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-206ENST00000592942 SLC5A4Q9NY91 659 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 CYP39A1Q9NYL5 469 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.44
TRIM47-206ENST00000592942 ASTN1O14525 1302 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 SOWAHBA6NEL2 793 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 SGPL1O95470 568 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 SMARCA1P28370 1054 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 MFSD14CQ5VZR4 134 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 APOA5Q6Q788 366 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 BLOC1S2Q6QNY1 142 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 MAMDC4Q6UXC1 1216 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 Q6ZUG5 572 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 ZNF467Q7Z7K2 595 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-206ENST00000592942 SRBD1Q8N5C6 995 aaKnown RBP17.82■□□□□ 0.44
TRIM47-206ENST00000592942 FANCBQ8NB91 859 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 TBC1D5Q92609 795 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 IL17RAQ96F46 866 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 PIGSQ96S52 555 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 TINF2Q9BSI4 451 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 TM6SF1Q9BZW5 370 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 CRISPLD2Q9H0B8 497 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM47-206ENST00000592942 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-206ENST00000592942 PNMA2Q9UL42 364 aa17.82■□□□□ 0.44
TRIM47-206ENST00000592942 RBBP6Q7Z6E9 1792 aaKnown RBP17.81■□□□□ 0.44
TRIM47-206ENST00000592942 ZBTB5O15062 677 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 PLEKHA8P1O95397 391 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 SNAI1O95863 264 aaPredicted RBP17.81■□□□□ 0.44
TRIM47-206ENST00000592942 CYBAP13498 195 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 CASTP20810 708 aaKnown RBP17.81■□□□□ 0.44
TRIM47-206ENST00000592942 PSMA5P28066 241 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 BAATQ14032 418 aaPredicted RBP17.81■□□□□ 0.44
TRIM47-206ENST00000592942 LHX8Q68G74 356 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 RUFY3Q7L099 469 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 CCDC144CPQ8IYA2 1237 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 CMTR1Q8N1G2 835 aaKnown RBP17.81■□□□□ 0.44
TRIM47-206ENST00000592942 U2AF1L4Q8WU68 220 aaKnown RBP17.81■□□□□ 0.44
TRIM47-206ENST00000592942 DEFB118Q96PH6 123 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 PLXNA1Q9UIW2 1896 aa17.81■□□□□ 0.44
TRIM47-206ENST00000592942 OPLAHO14841 1288 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 CALM1P0DP23 149 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 CALM2P0DP24 149 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 CALM3P0DP25 149 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 USH1GQ495M9 461 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 NSMFQ6X4W1 530 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 FBXO11Q86XK2 927 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 RGS22Q8NE09 1264 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-206ENST00000592942 SPZ1Q9BXG8 430 aa17.8■□□□□ 0.44
TRIM47-206ENST00000592942 PFASO15067 1338 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 POTEB2H3BUK9 544 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 DHX16O60231 1041 aaKnown RBP17.79■□□□□ 0.44
TRIM47-206ENST00000592942 ZNF865P0CJ78 1059 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-206ENST00000592942 KIF5BP33176 963 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 EVCP57679 992 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 APOBRQ0VD83 1088 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 FUT2Q10981 343 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 TOB2Q14106 344 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-206ENST00000592942 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
TRIM47-206ENST00000592942 LZTS2Q9BRK4 669 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 AMNQ9BXJ7 453 aa17.79■□□□□ 0.44
TRIM47-206ENST00000592942 DDX49Q9Y6V7 483 aaKnown RBP17.79■□□□□ 0.44
TRIM47-206ENST00000592942 ABCB11O95342 1321 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 PNMA6FA0A0J9YX94 578 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 KLF18A0A0U1RQI7 1052 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 CDC27P30260 824 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 GNAQP50148 359 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 MNX1P50219 401 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-206ENST00000592942 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
TRIM47-206ENST00000592942 TMTC3Q6ZXV5 915 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 UBE2Q1Q7Z7E8 422 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 MICU3Q86XE3 530 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 HOMER1Q86YM7 354 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 BRF1Q92994 677 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 KATNBL1Q9H079 304 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 OGDHLQ9ULD0 1010 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 LCTP09848 1927 aa17.78■□□□□ 0.44
TRIM47-206ENST00000592942 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 ZBTB43O43298 467 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 ANAPC15P60006 121 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 SLC30A10Q6XR72 485 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 RNF207Q6ZRF8 634 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
TRIM47-206ENST00000592942 MAF1Q9H063 256 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 NRBP1Q9UHY1 535 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 MRPL11Q9Y3B7 192 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms