RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 KCNJ6P48051 423 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 C2orf54Q08AI8 447 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 MRPL44Q9H9J2 332 aaKnown RBP18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 KCNQ4P56696 695 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 LARP4BQ92615 738 aaKnown RBP18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 PKD2L1Q9P0L9 805 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 UTP11Q9Y3A2 253 aaKnown RBP18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 ADGRG1Q9Y653 693 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 FLOT1O75955 427 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 MYL1P05976 194 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 TBCKQ8TEA7 893 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 PSTPIP2Q9H939 334 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 BSDC1Q9NW68 430 aaPredicted RBP18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 FAM170AA1A519 330 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 CSF1RP07333 972 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 GNGT1P63211 74 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 OVOS2A0A0G2JMS6 1433 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 GTF2IP78347 998 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 PTPROQ16827 1216 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 CCDC25Q86WR0 208 aa18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 NSRP1Q9H0G5 558 aaKnown RBP18.94■□□□□ 0.62
SMARCA4-215ENST00000590574 RNF40O75150 1001 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 INPP5BP32019 993 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 CYP27A1Q02318 531 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 CASP8Q14790 479 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 PPP4R3AQ6IN85 833 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 IPO4Q8TEX9 1081 aaKnown RBP18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 TBC1D22AQ8WUA7 517 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 PPM1EQ8WY54 764 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 ST7Q9NRC1 585 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 KIF4AO95239 1232 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 LRRC41Q15345 812 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 PEX26Q7Z412 305 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 ANKS4BQ8N8V4 417 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 LRRC45Q96CN5 670 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 CCDC114Q96M63 670 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 TCP10Q12799 353 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 A6NNZ2 444 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 GOLGA8KD6RF30 607 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 CCNE1P24864 410 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 CTNNA2P26232 953 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 PFKFB3Q16875 520 aaPredicted RBP18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 TUBB8Q3ZCM7 444 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 PIGSQ96S52 555 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 MTA3Q9BTC8 594 aa18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 STMN4Q9H169 189 aaPredicted RBP18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 MTRF1LQ9UGC7 380 aaKnown RBP18.93■□□□□ 0.62
SMARCA4-215ENST00000590574 FAM205CA6NFA0 338 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 KCNK3O14649 394 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 PRCPP42785 496 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 ZBED6P86452 979 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 LMTK3Q96Q04 1460 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 TADA3O75528 432 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 FAM26FQ5R3K3 315 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 MSL1Q68DK7 614 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 MYCT1Q8N699 235 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 EXOC4Q96A65 974 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■■■■ 115.8
SMARCA4-215ENST00000590574 RICTORQ6R327 1708 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 ACTN2P35609 894 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 USP40Q9NVE5 1235 aa18.92■□□□□ 0.62
SMARCA4-215ENST00000590574 PNPLA7Q6ZV29 1317 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 MOCS3O95396 460 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 HNRNPH2P55795 449 aaKnown RBP18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 USP37Q86T82 979 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 NAP1L3Q99457 506 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 EPB41L4AQ9HCS5 686 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 GJC1P36383 396 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 SEL1L2Q5TEA6 688 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 CAPS2Q9BXY5 557 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 PPP1R7Q15435 360 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 FMNL3Q8IVF7 1028 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 CCDC170Q8IYT3 715 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 CXCR5P32302 372 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 DIXDC1Q155Q3 683 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 DAAM2Q86T65 1068 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 IRX2Q9BZI1 471 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 PCDHB13Q9Y5F0 798 aa18.91■□□□□ 0.62
SMARCA4-215ENST00000590574 XRCC5P13010 732 aaKnown RBP18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 ATP1A2P50993 1020 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 ADAM9Q13443 819 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 ZCCHC17Q9NP64 241 aaKnown RBP18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 MAN2A1Q16706 1144 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 PRR16Q569H4 304 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 ZNF512BQ96KM6 892 aaPredicted RBP18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 PAIP2Q9BPZ3 127 aaKnown RBP18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 SH3GLB2Q9NR46 395 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 A0A1W2PRG0 241 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 SRGAP2O75044 1071 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 TTC19Q6DKK2 380 aaPredicted RBP18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 SYCE1Q8N0S2 351 aa18.9■□□□□ 0.62
SMARCA4-215ENST00000590574 POTEDQ86YR6 584 aa18.89■□□□□ 0.62
SMARCA4-215ENST00000590574 CCDC50Q8IVM0 306 aa18.89■□□□□ 0.62
SMARCA4-215ENST00000590574 U2AF1L4Q8WU68 220 aaKnown RBP18.89■□□□□ 0.62
SMARCA4-215ENST00000590574 MTUS1Q9ULD2 1270 aa18.89■□□□□ 0.62
SMARCA4-215ENST00000590574 LGALS16A8MUM7 142 aa18.89■□□□□ 0.61
SMARCA4-215ENST00000590574 TOM1O60784 492 aa18.89■□□□□ 0.61
SMARCA4-215ENST00000590574 ZSCAN20P17040 1043 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms