RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	SUPT20H	Q8NEM7	779 aa		27.82	■■■□□ 2.04
RTN2-208	ENST00000590526	CCDC17	Q96LX7	622 aa		27.82	■■■□□ 2.04
RTN2-208	ENST00000590526	GDA	Q9Y2T3	454 aa		27.82	■■■□□ 2.04
RTN2-208	ENST00000590526	PPP1R3G	B7ZBB8	358 aa		27.82	■■■□□ 2.04
RTN2-208	ENST00000590526	C16orf45	Q96MC5	204 aa	Predicted RBP	27.82	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L15	C9J2P7	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L13	C9JLJ4	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L11	C9JVI0	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L18	D6R9N7	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L22	D6RA61	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L17	D6RBQ6	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L19	D6RCP7	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L20	D6RJB6	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	UBA7	P41226	1012 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L24	Q0WX57	530 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	DHX8	Q14562	1220 aa	Known RBP	27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	USP17L6P	Q6QN14	398 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	VEZT	Q9HBM0	779 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	CTNND2	Q9UQB3	1225 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526		A0A1W2PRG0	241 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	QRICH1	Q2TAL8	776 aa		27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	UTP14C	Q5TAP6	766 aa	Known RBP	27.81	■■■□□ 2.04
RTN2-208	ENST00000590526	SPDYE2B	A6NHP3	402 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	SPDYE6	P0CI01	402 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	CDK11B	P21127	795 aa	Known RBP	27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	RRAGB	Q5VZM2	374 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	TRIML1	Q8N9V2	468 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	TRMT1	Q9NXH9	659 aa	Known RBP	27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	ZBTB5	O15062	677 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	ECE1	P42892	770 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	CC2D2B	Q6DHV5	1058 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526	KANSL2	Q9H9L4	492 aa		27.8	■■■□□ 2.04
RTN2-208	ENST00000590526		F5H6K3	240 aa		27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	ZNF18	P17022	549 aa		27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	PLCG1	P19174	1290 aa		27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	KLRC3	Q07444	240 aa		27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	MIGA2	Q7L4E1	593 aa		27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	ENOX1	Q8TC92	643 aa	Known RBP	27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	TXLNA	P40222	546 aa		27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	CCDC84	Q86UT8	332 aa	Predicted RBP	27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	ZNF70	Q9UC06	446 aa	Predicted RBP	27.79	■■■□□ 2.04
RTN2-208	ENST00000590526	ESYT2	A0FGR8	921 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	PDE4C	Q08493	712 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	KIAA1755	Q5JYT7	1200 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	GPATCH4	Q5T3I0	446 aa	Known RBP	27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	GSDMA	Q96QA5	445 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	GML	Q99445	158 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	TMEM39B	Q9GZU3	492 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	SYNRG	Q9UMZ2	1314 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	GTPBP6	O43824	516 aa	Predicted RBP	27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	NDUFB10	O96000	172 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	CABP7	Q86V35	215 aa		27.78	■■■□□ 2.04
RTN2-208	ENST00000590526	RPN1	P04843	607 aa	Known RBP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	DLGAP5	Q15398	846 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	CDC37	Q16543	378 aa	Predicted RBP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	USH1G	Q495M9	461 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	RTKN2	Q8IZC4	609 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	TSC1	Q92574	1164 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	MMTAG2	Q9BU76	263 aa	Known RBP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	NYAP2	Q9P242	653 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	POTEM	A6NI47	508 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	VIL1	P09327	827 aa	Known RBP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	IK	Q13123	557 aa	Predicted RBP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	TMEM179	Q6ZVK1	233 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	ACER1	Q8TDN7	264 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	P2RX7	Q99572	595 aa	Known RBP	27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	RIC8A	Q9NPQ8	531 aa		27.77	■■■□□ 2.04
RTN2-208	ENST00000590526	MKL1	Q969V6	931 aa		27.76	■■■□□ 2.03
RTN2-208	ENST00000590526	NUDT12	Q9BQG2	462 aa		27.76	■■■□□ 2.03
RTN2-208	ENST00000590526	DACH1	Q9UI36	760 aa		27.76	■■■□□ 2.03
RTN2-208	ENST00000590526	CNTNAP1	P78357	1384 aa		27.76	■■■□□ 2.03
RTN2-208	ENST00000590526	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	MTMR8	Q96EF0	704 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	CCDC34	Q96HJ3	373 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	PSMD1	Q99460	953 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	PSTPIP2	Q9H939	334 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	PCDHA1	Q9Y5I3	950 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	TEX33	O43247	280 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	ENTPD3	O75355	529 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	ZYX	Q15942	572 aa	Known RBP	27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	CALCRL	Q16602	461 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	RBM26	Q5T8P6	1007 aa	Known RBP	27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	ATRNL1	Q5VV63	1379 aa		27.75	■■■□□ 2.03
RTN2-208	ENST00000590526	UQCRHL	A0A096LP55	91 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	UQCRH	P07919	91 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	NBPF9	Q3BBW0	867 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	CREBRF	Q8IUR6	639 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	VSTM4	Q8IW00	320 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	TRIM49B	A6NDI0	452 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	DYNC1I1	O14576	645 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	PRPH	P41219	470 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	HPS3	Q969F9	1004 aa		27.74	■■■□□ 2.03
RTN2-208	ENST00000590526	EGFR	P00533	1210 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	CLK2	P49760	499 aa	Known RBP	27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	CXCL9	Q07325	125 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	DMTN	Q08495	405 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	CUL5	Q93034	780 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	EEF2KMT	Q96G04	330 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	MTMR9	Q96QG7	549 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms