RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 TMEM67Q5HYA8 995 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 PRPF38BQ5VTL8 546 aaKnown RBP11.54□□□□□ -0.56
PTPN2-208ENST00000589216 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 ADGRF4Q8IZF3 695 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 IGDCC4Q8TDY8 1250 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 LRRC2Q9BYS8 371 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 KATNBL1Q9H079 304 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 CYP39A1Q9NYL5 469 aa11.54□□□□□ -0.56
PTPN2-208ENST00000589216 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
PTPN2-208ENST00000589216 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
PTPN2-208ENST00000589216 SH2B2O14492 632 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-208ENST00000589216 SEPT4O43236 478 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 PPP1R11O60927 126 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-208ENST00000589216 COL6A1P12109 1028 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 PTGS1P23219 599 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-208ENST00000589216 TROAPQ12815 778 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 WTAPQ15007 396 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 QRICH1Q2TAL8 776 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-208ENST00000589216 RAB11FIP4Q86YS3 637 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 ANKLE1Q8NAG6 615 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 TCEANC2Q96MN5 208 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-208ENST00000589216 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-208ENST00000589216 SYNGAP1Q96PV0 1343 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 LTBP2Q14767 1821 aa11.53□□□□□ -0.56
PTPN2-208ENST00000589216 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
PTPN2-208ENST00000589216 KLRF2D3W0D1 207 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 OPLAHO14841 1288 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 CYTH3O43739 400 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.57
PTPN2-208ENST00000589216 RXRAP19793 462 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
PTPN2-208ENST00000589216 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 C11orf49Q9H6J7 331 aa11.52□□□□□ -0.57
PTPN2-208ENST00000589216 KIAA1217Q5T5P2 1943 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 MYADML2A6NDP7 307 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 H0YGN5 161 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 MSCO60682 206 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 CPA1P15085 419 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 MCM5P33992 734 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
PTPN2-208ENST00000589216 TMEM63BQ5T3F8 832 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 GJC2Q5T442 439 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-208ENST00000589216 ERICH6BQ5W0A0 696 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 POTEHQ6S545 545 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 FBXO16Q8IX29 292 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-208ENST00000589216 ZNF654Q8IZM8 581 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 MSL3Q8N5Y2 521 aaKnown RBP11.51□□□□□ -0.57
PTPN2-208ENST00000589216 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 MTMR8Q96EF0 704 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 VAT1LQ9HCJ6 419 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 COL20A1Q9P218 1284 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 CNPY2Q9Y2B0 182 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
PTPN2-208ENST00000589216 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.5□□□□□ -0.57
PTPN2-208ENST00000589216 ERICH2A1L162 156 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 PTPDC1A2A3K4 754 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 ADAMTS4O75173 837 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 PGK1P00558 417 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
PTPN2-208ENST00000589216 AKR1A1P14550 325 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 RPS6P62753 249 aaKnown RBP11.5□□□□□ -0.57
PTPN2-208ENST00000589216 LRRC41Q15345 812 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 LRRC26Q2I0M4 334 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 HOMER1Q86YM7 354 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 DPF3Q92784 378 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 PIGSQ96S52 555 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 HTATIP2Q9BUP3 242 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
PTPN2-208ENST00000589216 DNM1LO00429 736 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 DDAH1O94760 285 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 RARBP10826 455 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 CALML3P27482 149 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 HSPA4P34932 840 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
PTPN2-208ENST00000589216 ACVR2BQ13705 512 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 RNF207Q6ZRF8 634 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 EEPD1Q7L9B9 569 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 CMTR1Q8N1G2 835 aaKnown RBP11.49□□□□□ -0.57
PTPN2-208ENST00000589216 NUP133Q8WUM0 1156 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 PIBF1Q8WXW3 757 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 KCNB2Q92953 911 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 TMEM87BQ96K49 555 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 RIOX1Q9H6W3 641 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 PDGFCQ9NRA1 345 aa11.49□□□□□ -0.57
PTPN2-208ENST00000589216 SNX14Q9Y5W7 946 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms