RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 RSPH9Q9H1X1 276 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 COMMD3-BMI1R4GMX3 469 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 RPRD2Q5VT52 1461 aaKnown RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 MAGEA13PA6NCF6 341 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 TMEM221A6NGB7 291 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 CACNA2D1P54289 1103 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 ADKP55263 362 aaKnown RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 TUBA3CQ13748 450 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 WTAPQ15007 396 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 NUTM2DQ5VT03 806 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 PACS1Q6VY07 963 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 HAUS7Q99871 368 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 POLD4Q9HCU8 107 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 SCHIP1Q9P0W5 487 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 RPAP1Q9BWH6 1393 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 CCT8L1PA6NM43 557 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 MAP3K7O43318 606 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 PYGMP11217 842 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 SP100P23497 879 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 SMUG1Q53HV7 270 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 ZNF713Q8N859 430 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 APPBP2Q92624 585 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 FANCLQ9NW38 375 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 ZBTB21Q9ULJ3 1066 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 ADAM9Q13443 819 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 CREB3L3Q68CJ9 461 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 IRGCQ6NXR0 463 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 KDM7AQ6ZMT4 941 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 RALYLQ86SE5 291 aaKnown RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 DQX1Q8TE96 717 aaKnown RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 HINFPQ9BQA5 517 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 STOML1Q9UBI4 398 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 ITIH6Q6UXX5 1313 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 IDO1P14902 403 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 PDE1AP54750 535 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 MYL5Q02045 173 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 PPP4R3AQ6IN85 833 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 SCAIQ8N9R8 606 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 RAB3IL1Q8TBN0 382 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 SPO11Q9Y5K1 396 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 AP3B1O00203 1094 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 TEX28O15482 410 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 LDHCP07864 332 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 GSTA1P08263 222 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 NQO1P15559 274 aaKnown RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 ENDOUP21128 410 aaKnown RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 CSE1LP55060 971 aaKnown RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 TEFQ10587 303 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 BIRC3Q13489 604 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 ADALQ6DHV7 355 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 IFT20Q8IY31 132 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 PRAM1Q96QH2 718 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 SLC4A7Q9Y6M7 1214 aa8.52□□□□□ -1.05
LAMA3-210ENST00000588770 EPRSP07814 1512 aaKnown RBP8.52□□□□□ -1.05
LAMA3-210ENST00000588770 UBN2Q6ZU65 1347 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 H0Y3Z8 333 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 DKC1O60832 514 aaKnown RBP eCLIP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 PIP4K2AP48426 406 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 PHLDB3Q6NSJ2 640 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 EMBQ6PCB8 327 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TOGARAM2Q6ZUX3 1019 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 CATIPQ7Z7H3 387 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 ANKRD13BQ86YJ7 626 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 CCDC125Q86Z20 511 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 CCDC42Q96M95 316 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 BHMT2Q9H2M3 363 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 CASQ2O14958 399 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 HGSO14964 777 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 SART1O43290 800 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 CYTH3O43739 400 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 BDNFP23560 247 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 SPA17Q15506 151 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TAF7Q15545 349 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 ME3Q16798 604 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 ATL3Q6DD88 541 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 PPP1R21Q6ZMI0 780 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 INTS8Q75QN2 995 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 VPS36Q86VN1 386 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TTC39CQ8N584 583 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 MRPS27Q92552 414 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 RPAP3Q9H6T3 665 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 ECT2Q9H8V3 914 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TTC21BQ7Z4L5 1316 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 YEATS4O95619 227 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 CLPPQ16740 277 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 ANO5Q75V66 913 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 FAM228AQ86W67 206 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 NOA1Q8NC60 698 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 DDHD1Q8NEL9 900 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 GPBP1L1Q9HC44 474 aaPredicted RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TSPY2A6NKD2 308 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 LMNAP02545 664 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TSPY3P0CV98 308 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TSPY8P0CW00 308 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms