RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 STAG2Q8N3U4 1231 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 CCDC12Q8WUD4 166 aaPredicted RBP9.48□□□□□ -0.89
APOC1-202ENST00000588750 MTMR8Q96EF0 704 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 AGBL1Q96MI9 1066 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 TCEANC2Q96MN5 208 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
APOC1-202ENST00000588750 GLT8D2Q9H1C3 349 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 JMJD4Q9H9V9 463 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 HOMER2Q9NSB8 354 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 GJD2Q9UKL4 321 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 ZNF536O15090 1300 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 NID2Q14112 1375 aa9.48□□□□□ -0.89
APOC1-202ENST00000588750 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 PTPDC1A2A3K4 754 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 ASB14A6NK59 587 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 MSCO60682 206 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 CTGFP29279 349 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 MCM2P49736 904 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 NEK4P51957 841 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 QRICH1Q2TAL8 776 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 USH1GQ495M9 461 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 RNF207Q6ZRF8 634 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 TMTC3Q6ZXV5 915 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 HOMER1Q86YM7 354 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 FAM177A1Q8N128 213 aaPredicted RBP9.47□□□□□ -0.89
APOC1-202ENST00000588750 USP6NLQ92738 828 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 CUL5Q93034 780 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 ARMC5Q96C12 935 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 MYL10Q9BUA6 226 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
APOC1-202ENST00000588750 SENP2Q9HC62 589 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 NRBP1Q9UHY1 535 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 GABRQQ9UN88 632 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 CNPY2Q9Y2B0 182 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 PCDHA1Q9Y5I3 950 aa9.47□□□□□ -0.89
APOC1-202ENST00000588750 MYH6P13533 1939 aa9.46□□□□□ -0.89
APOC1-202ENST00000588750 SEC24BO95487 1268 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 CPA1P15085 419 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 XBP1P17861 261 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 NSMFQ6X4W1 530 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 RASGRP2Q7LDG7 609 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 CCDC144CPQ8IYA2 1237 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 DNERQ8NFT8 737 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 WASF1Q92558 559 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 ABHD8Q96I13 439 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 ZSCAN31Q96LW9 406 aaPredicted RBP9.46□□□□□ -0.9
APOC1-202ENST00000588750 PIGSQ96S52 555 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 RNF26Q9BY78 433 aaPredicted RBP9.46□□□□□ -0.9
APOC1-202ENST00000588750 BACH2Q9BYV9 841 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
APOC1-202ENST00000588750 BRPF3Q9ULD4 1205 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 RIPK3Q9Y572 518 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 PCNTO95613 3336 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 RPTORQ8N122 1335 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 SYNGAP1Q96PV0 1343 aa9.46□□□□□ -0.9
APOC1-202ENST00000588750 GCOM1H8Y6P7 765 aaPredicted RBP9.45□□□□□ -0.9
APOC1-202ENST00000588750 PEX10O60683 326 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 INHAP05111 366 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 POLR2MP0CAP2 368 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 RXRAP19793 462 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
APOC1-202ENST00000588750 SNAP25P60880 206 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 TOB2Q14106 344 aaPredicted RBP9.45□□□□□ -0.9
APOC1-202ENST00000588750 ZNF792Q3KQV3 632 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 MCTP2Q6DN12 878 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
APOC1-202ENST00000588750 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 MAML3Q96JK9 1138 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 ZNF333Q96JL9 665 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 TINF2Q9BSI4 451 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
APOC1-202ENST00000588750 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
APOC1-202ENST00000588750 CYP39A1Q9NYL5 469 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
APOC1-202ENST00000588750 DNAJC25-GNG10A0A024R161 153 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
APOC1-202ENST00000588750 CYTH3O43739 400 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 COBLO75128 1261 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 DEXIO95424 95 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 IFNAR1P17181 557 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 CALML3P27482 149 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 GNA11P29992 359 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 AK2P54819 239 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 RPS6P62753 249 aaKnown RBP9.44□□□□□ -0.9
APOC1-202ENST00000588750 SSRP1Q08945 709 aaKnown RBP9.44□□□□□ -0.9
APOC1-202ENST00000588750 MAMDC4Q6UXC1 1216 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 NPLOC4Q8TAT6 608 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 BICD2Q8TD16 824 aa9.44□□□□□ -0.9
APOC1-202ENST00000588750 NSUN6Q8TEA1 469 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms