RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 LLPHQ9BRT6 129 aaKnown RBP10.48□□□□□ -0.73
CIRBP-218ENST00000588344 GLT8D2Q9H1C3 349 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 SRRDQ9UH36 339 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 DIS3Q9Y2L1 958 aaKnown RBP10.48□□□□□ -0.73
CIRBP-218ENST00000588344 TRIM17Q9Y577 477 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 PCDHA1Q9Y5I3 950 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 PFASO15067 1338 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 LOC102724159A0A0B4J2E5 919 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 B4DLN1 442 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 HOXC6P09630 235 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 XBP1P17861 261 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 RGS2P41220 211 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 SLC4A3P48751 1232 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 MRPL12P52815 198 aaKnown RBP10.47□□□□□ -0.73
CIRBP-218ENST00000588344 SNAP25P60880 206 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 SCRN1Q12765 414 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 MAP2K5Q13163 448 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 STK3Q13188 491 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 PWP2Q15269 919 aaKnown RBP10.47□□□□□ -0.73
CIRBP-218ENST00000588344 NTRK3Q16288 839 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 ME3Q16798 604 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 PFKFB3Q16875 520 aaPredicted RBP10.47□□□□□ -0.73
CIRBP-218ENST00000588344 MORN1Q5T089 497 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 DPP9Q86TI2 863 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 RAB11FIP4Q86YS3 637 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 MSL3Q8N5Y2 521 aaKnown RBP10.47□□□□□ -0.73
CIRBP-218ENST00000588344 GTF3C6Q969F1 213 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
CIRBP-218ENST00000588344 CPVLQ9H3G5 476 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 RIPK3Q9Y572 518 aa10.47□□□□□ -0.73
CIRBP-218ENST00000588344 DEXIO95424 95 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 SCG2P13521 617 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 ADORA2AP29274 412 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 FLT3LGP49771 235 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 SLC35G1Q2M3R5 365 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 USH1GQ495M9 461 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 ZNF467Q7Z7K2 595 aaPredicted RBP10.46□□□□□ -0.73
CIRBP-218ENST00000588344 CMTR1Q8N1G2 835 aaKnown RBP10.46□□□□□ -0.73
CIRBP-218ENST00000588344 RAET1EQ8TD07 263 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 PXYLP1Q8TE99 480 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 CLEC4DQ8WXI8 215 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 USP6NLQ92738 828 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 MPHOSPH6Q99547 160 aaKnown RBP10.46□□□□□ -0.73
CIRBP-218ENST00000588344 SLC26A6Q9BXS9 759 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 NCOA5Q9HCD5 579 aaKnown RBP10.46□□□□□ -0.73
CIRBP-218ENST00000588344 SH3GLB2Q9NR46 395 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 BARHL2Q9NY43 387 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 CNTNAP5Q8WYK1 1306 aa10.46□□□□□ -0.73
CIRBP-218ENST00000588344 PTPRFP10586 1907 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 STK36Q9NRP7 1315 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 PEX10O60683 326 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 CTGFP29279 349 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 GNA11P29992 359 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
CIRBP-218ENST00000588344 GHRHRQ02643 423 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 GALNT17Q6IS24 598 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 FBXO46Q6PJ61 603 aaPredicted RBP10.45□□□□□ -0.74
CIRBP-218ENST00000588344 RNF207Q6ZRF8 634 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 NOL8Q76FK4 1167 aaKnown RBP10.45□□□□□ -0.74
CIRBP-218ENST00000588344 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 DNERQ8NFT8 737 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 PIBF1Q8WXW3 757 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 CUL5Q93034 780 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 SNX21Q969T3 373 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 ARHGAP39Q9C0H5 1083 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 PSTPIP2Q9H939 334 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 A1CFQ9NQ94 594 aaKnown RBP10.45□□□□□ -0.74
CIRBP-218ENST00000588344 CYP39A1Q9NYL5 469 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 ADD3Q9UEY8 706 aaKnown RBP10.45□□□□□ -0.74
CIRBP-218ENST00000588344 PTPN22Q9Y2R2 807 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 KIF3AQ9Y496 699 aa10.45□□□□□ -0.74
CIRBP-218ENST00000588344 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.45□□□□□ -0.74
CIRBP-218ENST00000588344 DNAJC25-GNG10A0A024R161 153 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 GCOM1H8Y6P7 765 aaPredicted RBP10.44□□□□□ -0.74
CIRBP-218ENST00000588344 PIK3CDO00329 1044 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 PPP1R11O60927 126 aaPredicted RBP10.44□□□□□ -0.74
CIRBP-218ENST00000588344 POLR2MP0CAP2 368 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 PRKCZQ05513 592 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 BAATQ14032 418 aaPredicted RBP10.44□□□□□ -0.74
CIRBP-218ENST00000588344 MUM1L1Q5H9M0 696 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 OLFML2BQ68BL8 750 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 NSMFQ6X4W1 530 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 CCDC148Q8NFR7 591 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 PHKBQ93100 1093 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 APBA2Q99767 749 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
CIRBP-218ENST00000588344 MYH4Q9Y623 1939 aa10.44□□□□□ -0.74
CIRBP-218ENST00000588344 ESYT2A0FGR8 921 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 PTPDC1A2A3K4 754 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms