RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 CIAPIN1Q6FI81 312 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 MRM1Q6IN84 353 aaKnown RBP4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 KIAA1211Q6ZU35 1233 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 TOM1L2Q6ZVM7 507 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 LRP10Q7Z4F1 713 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 TTC6Q86TZ1 520 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 DEFB123Q8N688 67 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 C19orf47Q8N9M1 422 aaKnown RBP4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 TMEM40Q8WWA1 233 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 TMPRSS13Q9BYE2 586 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 CCDC113Q9H0I3 377 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 DDX21Q9NR30 783 aaKnown RBP eCLIP4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 STK17AQ9UEE5 414 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 CCNL1Q9UK58 526 aaPredicted RBP4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 CSADQ9Y600 493 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 SNCAIPQ9Y6H5 919 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 USP34Q70CQ2 3546 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 CFAP54Q96N23 3096 aa4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 DICER1Q9UPY3 1922 aaKnown RBP4.58□□□□□ -1.68
LDLRAD4-209ENST00000587440 KAT6BQ8WYB5 2073 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 SBNO2Q9Y2G9 1366 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 WDR17Q8IZU2 1322 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 PRAMEF27A3QJZ7 478 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 ANKRD62A6NC57 917 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 SLC22A31A6NKX4 558 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 ENPP3O14638 875 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 GJB6O95452 261 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 HSP90B1P14625 803 aaKnown RBP4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 KCNA3P22001 575 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 GUCY2CP25092 1073 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 NOGQ13253 232 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 PPP2R5EQ16537 467 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 TMEM201Q5SNT2 666 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 FBXO46Q6PJ61 603 aaPredicted RBP4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 HDXQ7Z353 690 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 ALYREFQ86V81 257 aaKnown RBP4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 C12orf40Q86WS4 652 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 CNTROBQ8N137 903 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 LILRB2Q8N423 598 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 DNAJC7Q99615 494 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 TM9SF2Q99805 663 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 ANP32EQ9BTT0 268 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 TAF1DQ9H5J8 278 aaPredicted RBP4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 GMIPQ9P107 970 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 HIF3AQ9Y2N7 669 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 R3HCC1Q9Y3T6 440 aaKnown RBP4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 TRPM7Q96QT4 1865 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 MUC6Q6W4X9 2439 aa4.57□□□□□ -1.68
LDLRAD4-209ENST00000587440 MYOM3Q5VTT5 1437 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 ABCC11Q96J66 1382 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 CCDC7Q96M83 1385 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 KIAA0100Q14667 2235 aaKnown RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PAPPA2Q9BXP8 1791 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 LTBP3Q9NS15 1303 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 TOGARAM1Q9Y4F4 1720 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 FAM229AH3BQW9 127 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 GNB5O14775 395 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 TMPRSS2O15393 492 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PDPK1O15530 556 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PLCG1P19174 1290 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 GRK4P32298 578 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 RASSF7Q02833 373 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 RASGRF1Q13972 1273 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PPM1JQ5JR12 505 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 C6orf15Q6UXA7 325 aaPredicted RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PNMA8AQ86V59 439 aaPredicted RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 SVOPQ8N4V2 548 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 TAB3Q8N5C8 712 aaPredicted RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 SH3TC2Q8TF17 1288 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 ELMO3Q96BJ8 720 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 ACSF2Q96CM8 615 aaPredicted RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 ATG4CQ96DT6 458 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 GSX1Q9H4S2 264 aaPredicted RBP4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 SUGCTQ9HAC7 445 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 MTMR10Q9NXD2 777 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PPP1R9AQ9ULJ8 1098 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 TACC3Q9Y6A5 838 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 CCDC88AQ3V6T2 1871 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 UBR3Q6ZT12 1888 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 TAF1LQ8IZX4 1826 aa4.56□□□□□ -1.68
LDLRAD4-209ENST00000587440 PPIP5K1Q6PFW1 1433 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 PPLO60437 1756 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 EIF3AQ14152 1382 aaKnown RBP4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 RPTORQ8N122 1335 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 MEGF11A6BM72 1044 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 TNFRSF10CO14798 259 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 TIAF1O95411 115 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 NEFMP07197 916 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 MMP10P09238 476 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 NME1P15531 152 aaKnown RBP4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 HSD3B2P26439 372 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 POLR2BP30876 1174 aaKnown RBP4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 ERVK-24P63145 666 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 INSM1Q01101 510 aaPredicted RBP4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 FXNQ16595 210 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 LRRFIP1Q32MZ4 808 aaKnown RBP4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 TRAPPC3LQ5T215 181 aa4.55□□□□□ -1.68
LDLRAD4-209ENST00000587440 ZBTB37Q5TC79 503 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms