RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 B4E1Z4 1266 aa21.31■■□□□ 1
HMG20B-216ENST00000585900 SOX1O00570 391 aaPredicted RBP21.31■■□□□ 1
HMG20B-216ENST00000585900 SNHG28P0DPA3 235 aa21.31■■□□□ 1
HMG20B-216ENST00000585900 GSPT1P15170 499 aaKnown RBP21.31■■□□□ 1
HMG20B-216ENST00000585900 CST5P28325 142 aaPredicted RBP21.31■■□□□ 1
HMG20B-216ENST00000585900 LRIT3Q3SXY7 679 aa21.31■■□□□ 1
HMG20B-216ENST00000585900 NOL8Q76FK4 1167 aaKnown RBP21.31■■□□□ 1
HMG20B-216ENST00000585900 PNMA1Q8ND90 353 aa21.31■■□□□ 1
HMG20B-216ENST00000585900 LRCH3Q96II8 777 aa21.31■■□□□ 1
HMG20B-216ENST00000585900 ADD3Q9UEY8 706 aaKnown RBP21.31■■□□□ 1
HMG20B-216ENST00000585900 SMCHD1A6NHR9 2005 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 SOWAHBA6NEL2 793 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 TLE2Q04725 743 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 KCNA10Q16322 511 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 KLHDC9Q8NEP7 349 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 GLT1D1Q96MS3 346 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 ZSCAN10Q96SZ4 725 aaPredicted RBP21.3■■□□□ 1
HMG20B-216ENST00000585900 UBAC1Q9BSL1 405 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 PDLIM7Q9NR12 457 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 DNAH12Q6ZR08 3092 aa21.3■■□□□ 1
HMG20B-216ENST00000585900 WDR19Q8NEZ3 1342 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 PTPDC1A2A3K4 754 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 PQBP1O60828 265 aaKnown RBP21.29■■□□□ 1
HMG20B-216ENST00000585900 CLTBP09497 229 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 GJA9P57773 515 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 TNFAIP2Q03169 654 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 KATNBL1Q9H079 304 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 UPF3AQ9H1J1 476 aaKnown RBP21.29■■□□□ 1
HMG20B-216ENST00000585900 TNKSO95271 1327 aa21.29■■□□□ 1
HMG20B-216ENST00000585900 BAATQ14032 418 aaPredicted RBP21.28■■□□□ 1
HMG20B-216ENST00000585900 GNASQ5JWF2 1037 aa21.28■■□□□ 1
HMG20B-216ENST00000585900 GPR153Q6NV75 609 aa21.28■■□□□ 1
HMG20B-216ENST00000585900 MPHOSPH6Q99547 160 aaKnown RBP21.28■■□□□ 1
HMG20B-216ENST00000585900 LOC102724159A0A0B4J2E5 919 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 MYADML2A6NDP7 307 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 DCDC2CA8MYV0 355 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 NFIBO00712 420 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 ADCY6O43306 1168 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 GOLGA8HP0CJ92 632 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 TRDNQ13061 729 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 PWP2Q15269 919 aaKnown RBP21.27■■□□□ 1
HMG20B-216ENST00000585900 ASPRV1Q53RT3 343 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 ENAHQ8N8S7 591 aaPredicted RBP21.27■■□□□ 1
HMG20B-216ENST00000585900 VTI1AQ96AJ9 217 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 VTA1Q9NP79 307 aa21.27■■□□□ 1
HMG20B-216ENST00000585900 ELP1O95163 1332 aa21.27■□□□□ 0.99
HMG20B-216ENST00000585900 MROH7Q68CQ1 1323 aa21.27■□□□□ 0.99
HMG20B-216ENST00000585900 MCM3APO60318 1980 aa21.27■□□□□ 0.99
HMG20B-216ENST00000585900 ASGR1P07306 291 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 CCSAPQ6IQ19 270 aaPredicted RBP21.26■□□□□ 0.99
HMG20B-216ENST00000585900 RNF207Q6ZRF8 634 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 EEPD1Q7L9B9 569 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 TLK2Q86UE8 772 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 FBXO16Q8IX29 292 aaPredicted RBP21.26■□□□□ 0.99
HMG20B-216ENST00000585900 ANKS1AQ92625 1134 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 AP5M1Q9H0R1 490 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 IL25Q9H293 177 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 ZSWIM5Q9P217 1185 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 LAMA3Q16787 3333 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 ASTN1O14525 1302 aa21.26■□□□□ 0.99
HMG20B-216ENST00000585900 TRIM43BA6NCK2 446 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 DHX16O60231 1041 aaKnown RBP21.25■□□□□ 0.99
HMG20B-216ENST00000585900 CHMLP26374 656 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 CALML3P27482 149 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 ALDH5A1P51649 535 aaPredicted RBP21.25■□□□□ 0.99
HMG20B-216ENST00000585900 IFIT1BQ5T764 474 aaKnown RBP21.25■□□□□ 0.99
HMG20B-216ENST00000585900 SLC30A10Q6XR72 485 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 ANKRD33Q7Z3H0 272 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 BADQ92934 168 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 TRIM43Q96BQ3 446 aaPredicted RBP21.25■□□□□ 0.99
HMG20B-216ENST00000585900 TOX2Q96NM4 488 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 TMEM39AQ9NV64 488 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 U3KPZ7 1027 aaPredicted RBP21.25■□□□□ 0.99
HMG20B-216ENST00000585900 LTBP2Q14767 1821 aa21.25■□□□□ 0.99
HMG20B-216ENST00000585900 A0A0U1RQG5 324 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-216ENST00000585900 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-216ENST00000585900 B4DLN1 442 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 ZEB2O60315 1214 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 PARP1P09874 1014 aaKnown RBP21.24■□□□□ 0.99
HMG20B-216ENST00000585900 RAG1P15918 1043 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 MRPL12P52815 198 aaKnown RBP21.24■□□□□ 0.99
HMG20B-216ENST00000585900 CDC37Q16543 378 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-216ENST00000585900 USH1GQ495M9 461 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 IQSEC1Q6DN90 963 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 SH3RF1Q7Z6J0 888 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 MORC4Q8TE76 937 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 CLEC4DQ8WXI8 215 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 UBA5Q9GZZ9 404 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 SZT2Q5T011 3432 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 LRRC37A2A6NM11 1700 aa21.24■□□□□ 0.99
HMG20B-216ENST00000585900 NKX3-2P78367 333 aa21.23■□□□□ 0.99
HMG20B-216ENST00000585900 RALYLQ86SE5 291 aaKnown RBP21.23■□□□□ 0.99
HMG20B-216ENST00000585900 PURBQ96QR8 312 aaKnown RBP21.23■□□□□ 0.99
HMG20B-216ENST00000585900 GNEQ9Y223 722 aaKnown RBP21.23■□□□□ 0.99
HMG20B-216ENST00000585900 KIAA0355O15063 1070 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 CABYRO75952 493 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 SMPD1P17405 629 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 RPS6P62753 249 aaKnown RBP21.22■□□□□ 0.99
HMG20B-216ENST00000585900 IRX5P78411 483 aaPredicted RBP21.22■□□□□ 0.99
HMG20B-216ENST00000585900 BEX3Q00994 111 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms