RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 NPLOC4Q8TAT6 608 aa13.5□□□□□ -0.25
LRFN3-202ENST00000585876 BRF1Q92994 677 aa13.5□□□□□ -0.25
LRFN3-202ENST00000585876 MAML3Q96JK9 1138 aa13.5□□□□□ -0.25
LRFN3-202ENST00000585876 TRERF1Q96PN7 1200 aa13.5□□□□□ -0.25
LRFN3-202ENST00000585876 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
LRFN3-202ENST00000585876 A1CFQ9NQ94 594 aaKnown RBP13.5□□□□□ -0.25
LRFN3-202ENST00000585876 KIAA1217Q5T5P2 1943 aa13.5□□□□□ -0.25
LRFN3-202ENST00000585876 KLF18A0A0U1RQI7 1052 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 PPP1R11O60927 126 aaPredicted RBP13.49□□□□□ -0.25
LRFN3-202ENST00000585876 TRAF1Q13077 416 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
LRFN3-202ENST00000585876 CCL14Q16627 93 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 DPP9Q86TI2 863 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 MICU3Q86XE3 530 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
LRFN3-202ENST00000585876 FAM133AQ8N9E0 248 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 NUP133Q8WUM0 1156 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 CLEC4DQ8WXI8 215 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 FGD4Q96M96 766 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
LRFN3-202ENST00000585876 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
LRFN3-202ENST00000585876 CYP39A1Q9NYL5 469 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
LRFN3-202ENST00000585876 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 PNMA6FA0A0J9YX94 578 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 NFIBO00712 420 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
LRFN3-202ENST00000585876 PLEKHA8P1O95397 391 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 RXRAP19793 462 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
LRFN3-202ENST00000585876 UBXN2AP68543 259 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 FGD1P98174 961 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 FUT2Q10981 343 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
LRFN3-202ENST00000585876 RTN1Q16799 776 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
LRFN3-202ENST00000585876 AMNQ9BXJ7 453 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 PAK6Q9NQU5 681 aaPredicted RBP13.48□□□□□ -0.25
LRFN3-202ENST00000585876 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
LRFN3-202ENST00000585876 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
LRFN3-202ENST00000585876 CNTNAP5Q8WYK1 1306 aa13.47□□□□□ -0.25
LRFN3-202ENST00000585876 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
LRFN3-202ENST00000585876 PGK2P07205 417 aa13.47□□□□□ -0.25
LRFN3-202ENST00000585876 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
LRFN3-202ENST00000585876 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
LRFN3-202ENST00000585876 PIGSQ96S52 555 aa13.47□□□□□ -0.25
LRFN3-202ENST00000585876 PDE4DIPQ5VU43 2346 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 ASTN1O14525 1302 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 RPTORQ8N122 1335 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 CCDC196A0A1B0GTZ2 297 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 GOLGA8AA7E2F4 631 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 OPLAHO14841 1288 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 CYBAP13498 195 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 CCL5P13501 91 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
LRFN3-202ENST00000585876 CAPN2P17655 700 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.25
LRFN3-202ENST00000585876 USH1GQ495M9 461 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 MFSD14CQ5VZR4 134 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 CCDC144CPQ8IYA2 1237 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 SAMD3Q8N6K7 520 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
LRFN3-202ENST00000585876 DDX11Q96FC9 970 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
LRFN3-202ENST00000585876 KIF2CQ99661 725 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 TINF2Q9BSI4 451 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 VAT1LQ9HCJ6 419 aa13.46□□□□□ -0.25
LRFN3-202ENST00000585876 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
LRFN3-202ENST00000585876 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 GJB1P08034 283 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
LRFN3-202ENST00000585876 CDC27P30260 824 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 HSD17B4P51659 736 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 CACNB2Q08289 660 aaPredicted RBP13.45□□□□□ -0.26
LRFN3-202ENST00000585876 TRIM32Q13049 653 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 MTFR1Q15390 333 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 IL27Q8NEV9 243 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 MORC4Q8TE76 937 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
LRFN3-202ENST00000585876 UNC93B1Q9H1C4 597 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
LRFN3-202ENST00000585876 BIN2Q9UBW5 565 aaPredicted RBP13.45□□□□□ -0.26
LRFN3-202ENST00000585876 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
LRFN3-202ENST00000585876 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
LRFN3-202ENST00000585876 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms