RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 RAD50Q92878 1312 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 A0A1W2PQ45 241 aaPredicted RBP20.1■□□□□ 0.81
ITGB4-213ENST00000584939 A0A1W2PQY0 241 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 ADCY6O43306 1168 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 GOLGA8HP0CJ92 632 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 ACLYP53396 1101 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 KCNA10Q16322 511 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 GPATCH4Q5T3I0 446 aaKnown RBP20.1■□□□□ 0.81
ITGB4-213ENST00000584939 TDHQ8IZJ6 230 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 PRDM5Q9NQX1 630 aaPredicted RBP20.1■□□□□ 0.81
ITGB4-213ENST00000584939 PNMA2Q9UL42 364 aa20.1■□□□□ 0.81
ITGB4-213ENST00000584939 ASTN1O14525 1302 aa20.09■□□□□ 0.81
ITGB4-213ENST00000584939 MYADML2A6NDP7 307 aa20.09■□□□□ 0.81
ITGB4-213ENST00000584939 NFIBO00712 420 aa20.09■□□□□ 0.81
ITGB4-213ENST00000584939 C6orf222P0C671 652 aaPredicted RBP20.09■□□□□ 0.81
ITGB4-213ENST00000584939 TLE2Q04725 743 aa20.09■□□□□ 0.81
ITGB4-213ENST00000584939 BAATQ14032 418 aaPredicted RBP20.09■□□□□ 0.81
ITGB4-213ENST00000584939 CCSAPQ6IQ19 270 aaPredicted RBP20.09■□□□□ 0.81
ITGB4-213ENST00000584939 ENAHQ8N8S7 591 aaPredicted RBP20.09■□□□□ 0.81
ITGB4-213ENST00000584939 PURBQ96QR8 312 aaKnown RBP20.09■□□□□ 0.81
ITGB4-213ENST00000584939 UBA5Q9GZZ9 404 aa20.09■□□□□ 0.81
ITGB4-213ENST00000584939 SPC25Q9HBM1 224 aa20.09■□□□□ 0.81
ITGB4-213ENST00000584939 DDX49Q9Y6V7 483 aaKnown RBP20.09■□□□□ 0.81
ITGB4-213ENST00000584939 TNKSO95271 1327 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 MOXD2PA6NHM9 499 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 GJA9P57773 515 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 IRX5P78411 483 aaPredicted RBP20.08■□□□□ 0.81
ITGB4-213ENST00000584939 TNFAIP2Q03169 654 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 NOL8Q76FK4 1167 aaKnown RBP20.08■□□□□ 0.81
ITGB4-213ENST00000584939 NUP133Q8WUM0 1156 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 CLEC4DQ8WXI8 215 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 LRCH3Q96II8 777 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 UBAC1Q9BSL1 405 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.81
ITGB4-213ENST00000584939 CPVLQ9H3G5 476 aa20.08■□□□□ 0.81
ITGB4-213ENST00000584939 LAMA4Q16363 1823 aa20.08■□□□□ 0.8
ITGB4-213ENST00000584939 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.07■□□□□ 0.8
ITGB4-213ENST00000584939 PTPDC1A2A3K4 754 aa20.07■□□□□ 0.8
ITGB4-213ENST00000584939 CST5P28325 142 aaPredicted RBP20.07■□□□□ 0.8
ITGB4-213ENST00000584939 PTH1RQ03431 593 aa20.07■□□□□ 0.8
ITGB4-213ENST00000584939 SH3RF1Q7Z6J0 888 aa20.07■□□□□ 0.8
ITGB4-213ENST00000584939 PCSK9Q8NBP7 692 aaKnown RBP20.07■□□□□ 0.8
ITGB4-213ENST00000584939 STARD7Q9NQZ5 370 aa20.07■□□□□ 0.8
ITGB4-213ENST00000584939 PDLIM7Q9NR12 457 aa20.07■□□□□ 0.8
ITGB4-213ENST00000584939 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 TRIM43BA6NCK2 446 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 LRIT3Q3SXY7 679 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 GNASQ5JWF2 1037 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 RNF207Q6ZRF8 634 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 EEPD1Q7L9B9 569 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 MORC4Q8TE76 937 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 TRIM43Q96BQ3 446 aaPredicted RBP20.06■□□□□ 0.8
ITGB4-213ENST00000584939 PDGFCQ9NRA1 345 aa20.06■□□□□ 0.8
ITGB4-213ENST00000584939 ADD3Q9UEY8 706 aaKnown RBP20.06■□□□□ 0.8
ITGB4-213ENST00000584939 PQBP1O60828 265 aaKnown RBP20.05■□□□□ 0.8
ITGB4-213ENST00000584939 CENPBP07199 599 aaPredicted RBP20.05■□□□□ 0.8
ITGB4-213ENST00000584939 ASGR1P07306 291 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 CALML3P27482 149 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 ASPRV1Q53RT3 343 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 IFIT1BQ5T764 474 aaKnown RBP20.05■□□□□ 0.8
ITGB4-213ENST00000584939 IQSEC1Q6DN90 963 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 SLC30A10Q6XR72 485 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 FBXO16Q8IX29 292 aaPredicted RBP20.05■□□□□ 0.8
ITGB4-213ENST00000584939 VTI1AQ96AJ9 217 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 CCDC136Q96JN2 1154 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 GLT1D1Q96MS3 346 aa20.05■□□□□ 0.8
ITGB4-213ENST00000584939 U3KPZ7 1027 aaPredicted RBP20.05■□□□□ 0.8
ITGB4-213ENST00000584939 CTAGE5O15320 804 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 SGSM2O43147 1006 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 CYP21A2P08686 494 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 CLTBP09497 229 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 PARP1P09874 1014 aaKnown RBP20.04■□□□□ 0.8
ITGB4-213ENST00000584939 SMPD1P17405 629 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 ALDH5A1P51649 535 aaPredicted RBP20.04■□□□□ 0.8
ITGB4-213ENST00000584939 NKX3-2P78367 333 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 TRDNQ13061 729 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 USH1GQ495M9 461 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 TAPT1Q6NXT6 567 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 ADGRF4Q8IZF3 695 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 BADQ92934 168 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 VTA1Q9NP79 307 aa20.04■□□□□ 0.8
ITGB4-213ENST00000584939 GNEQ9Y223 722 aaKnown RBP20.04■□□□□ 0.8
ITGB4-213ENST00000584939 RANBP2P49792 3224 aaKnown RBP20.04■□□□□ 0.8
ITGB4-213ENST00000584939 ELP1O95163 1332 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 RPS6P62753 249 aaKnown RBP20.03■□□□□ 0.8
ITGB4-213ENST00000584939 BEX3Q00994 111 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 SEC23AQ15436 765 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 CDC37Q16543 378 aaPredicted RBP20.03■□□□□ 0.8
ITGB4-213ENST00000584939 ANKRD33Q7Z3H0 272 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 TLK2Q86UE8 772 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 AP5M1Q9H0R1 490 aa20.03■□□□□ 0.8
ITGB4-213ENST00000584939 LOC102724159A0A0B4J2E5 919 aa20.02■□□□□ 0.8
ITGB4-213ENST00000584939 DYNC1LI2O43237 492 aaPredicted RBP20.02■□□□□ 0.8
ITGB4-213ENST00000584939 DHX16O60231 1041 aaKnown RBP20.02■□□□□ 0.8
ITGB4-213ENST00000584939 PTGS1P23219 599 aa20.02■□□□□ 0.8
ITGB4-213ENST00000584939 PWP2Q15269 919 aaKnown RBP20.02■□□□□ 0.8
ITGB4-213ENST00000584939 KIAA1211Q6ZU35 1233 aa20.02■□□□□ 0.8
ITGB4-213ENST00000584939 RGS22Q8NE09 1264 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms