RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 KATNBL1Q9H079 304 aa25.13■■□□□ 1.61
PPP4R1-228ENST00000584074 SYNRGQ9UMZ2 1314 aa25.12■■□□□ 1.61
PPP4R1-228ENST00000584074 MAGEA10P43363 369 aaPredicted RBP25.12■■□□□ 1.61
PPP4R1-228ENST00000584074 BAATQ14032 418 aaPredicted RBP25.12■■□□□ 1.61
PPP4R1-228ENST00000584074 CENPQQ7L2Z9 268 aaPredicted RBP25.12■■□□□ 1.61
PPP4R1-228ENST00000584074 PHF24Q9UPV7 400 aa25.12■■□□□ 1.61
PPP4R1-228ENST00000584074 ATP11BQ9Y2G3 1177 aa25.12■■□□□ 1.61
PPP4R1-228ENST00000584074 ASB14A6NK59 587 aa25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 DUSP11O75319 330 aaKnown RBP25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 TRDNQ13061 729 aa25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 IFIT1BQ5T764 474 aaKnown RBP25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 CLEC4DQ8WXI8 215 aa25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 SMCHD1A6NHR9 2005 aa25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 TRIOBPQ9H2D6 2365 aa25.11■■□□□ 1.61
PPP4R1-228ENST00000584074 IRX5P78411 483 aaPredicted RBP25.1■■□□□ 1.61
PPP4R1-228ENST00000584074 SEC23AQ15436 765 aa25.1■■□□□ 1.61
PPP4R1-228ENST00000584074 ASPRV1Q53RT3 343 aa25.1■■□□□ 1.61
PPP4R1-228ENST00000584074 MAP4K1Q92918 833 aa25.1■■□□□ 1.61
PPP4R1-228ENST00000584074 WDR19Q8NEZ3 1342 aa25.1■■□□□ 1.61
PPP4R1-228ENST00000584074 MYADML2A6NDP7 307 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 E7EWF7 191 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 BMP8BP34820 402 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 SNX17Q15036 470 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 TRIM60Q495X7 471 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 ADGRF4Q8IZF3 695 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 KLHDC9Q8NEP7 349 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 PNMA2Q9UL42 364 aa25.09■■□□□ 1.61
PPP4R1-228ENST00000584074 A0A1W2PQ45 241 aaPredicted RBP25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 A0A1W2PQY0 241 aa25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 PTPDC1A2A3K4 754 aa25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 PARP1P09874 1014 aaKnown RBP25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 USH1GQ495M9 461 aa25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 SLC30A10Q6XR72 485 aa25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 STOX1Q6ZVD7 989 aa25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 RBM8AQ9Y5S9 174 aaKnown RBP25.08■■□□□ 1.61
PPP4R1-228ENST00000584074 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 A0A1W2PPC1 479 aa25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 ACLYP53396 1101 aa25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 MDM2Q00987 491 aaPredicted RBP25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 KCNA10Q16322 511 aa25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 CDC37Q16543 378 aaPredicted RBP25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 CCSAPQ6IQ19 270 aaPredicted RBP25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 EEPD1Q7L9B9 569 aa25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 TSEN34Q9BSV6 310 aaKnown RBP25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 SZT2Q5T011 3432 aa25.07■■□□□ 1.6
PPP4R1-228ENST00000584074 C6orf222P0C671 652 aaPredicted RBP25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 CALML3P27482 149 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 TNFAIP2Q03169 654 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 C1orf53Q5VUE5 145 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 RNF207Q6ZRF8 634 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 RALYLQ86SE5 291 aaKnown RBP25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 STAG2Q8N3U4 1231 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 UPF3AQ9H1J1 476 aaKnown RBP25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 VAT1LQ9HCJ6 419 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 PDGFCQ9NRA1 345 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 ADD3Q9UEY8 706 aaKnown RBP25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 LAMA3Q16787 3333 aa25.06■■□□□ 1.6
PPP4R1-228ENST00000584074 IFIT3O14879 490 aaKnown RBP25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 DHX16O60231 1041 aaKnown RBP25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 ALDH5A1P51649 535 aaPredicted RBP25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 GJA9P57773 515 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 RPS6P62753 249 aaKnown RBP25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 KIAA1211Q6ZU35 1233 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 NOL8Q76FK4 1167 aaKnown RBP25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 CHST3Q7LGC8 479 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 FBXO16Q8IX29 292 aaPredicted RBP25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 NCOA7Q8NI08 942 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 MORC4Q8TE76 937 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 ESYT1Q9BSJ8 1104 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 JMJD4Q9H9V9 463 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 SENP2Q9HC62 589 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 MCM3APO60318 1980 aa25.05■■□□□ 1.6
PPP4R1-228ENST00000584074 TLE2Q04725 743 aa25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 TAPT1Q6NXT6 567 aa25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 UBE2OQ9C0C9 1292 aaKnown RBP25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 LSG1Q9H089 658 aaKnown RBP25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 SPC25Q9HBM1 224 aa25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 PRDM5Q9NQX1 630 aaPredicted RBP25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 PRKAG2Q9UGJ0 569 aa25.04■■□□□ 1.6
PPP4R1-228ENST00000584074 MOXD2PA6NHM9 499 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 CTAGE5O15320 804 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 PTGS1P23219 599 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 CST5P28325 142 aaPredicted RBP25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 QRICH1Q2TAL8 776 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 BMP2KLQ5H9B9 411 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 GNASQ5JWF2 1037 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 TMEM63BQ5T3F8 832 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 LBHD1Q9BQE6 289 aaPredicted RBP25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 MAD2L2Q9UI95 211 aa25.03■■□□□ 1.6
PPP4R1-228ENST00000584074 LCTP09848 1927 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 KLRF2D3W0D1 207 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 SMPD1P17405 629 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 ANTXR2P58335 489 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 SH3RF1Q7Z6J0 888 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 NUP133Q8WUM0 1156 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 VTA1Q9NP79 307 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 STARD7Q9NQZ5 370 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 PDLIM7Q9NR12 457 aa25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 GNEQ9Y223 722 aaKnown RBP25.02■■□□□ 1.6
PPP4R1-228ENST00000584074 ERICH2A1L162 156 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms