RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 GAP43P17677 238 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 CRKLP46109 303 aaKnown RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 IRX5P78411 483 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 ABCB5Q2M3G0 1257 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 ARMCX5Q6P1M9 558 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 PDZD4Q76G19 769 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 GPKOWQ92917 476 aaPredicted RBP eCLIP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 VPS37BQ9H9H4 285 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 RPAP1Q9BWH6 1393 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 BBOX1O75936 387 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 RSAD2Q8WXG1 361 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 FAM81BQ96LP2 452 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 WDR17Q8IZU2 1322 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 METP08581 1390 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 TROVE2P10155 538 aaKnown RBP eCLIP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 ABCB4P21439 1286 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 POLR2FP61218 127 aaKnown RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 MRRFQ96E11 262 aaKnown RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 NRBP2Q9NSY0 501 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 RABGAP1Q9Y3P9 1069 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-214ENST00000583038 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
ERBB2-214ENST00000583038 DTNBO60941 627 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PKP1Q13835 747 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 EXOC3L4Q17RC7 722 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PPP1R2P3Q6NXS1 205 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 CASC4Q6P4E1 433 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 LARP4BQ92615 738 aaKnown RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 DESI2Q9BSY9 194 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PUS3Q9BZE2 481 aaKnown RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 STX2P32856 288 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 SLC12A2P55011 1212 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 DMP1Q13316 513 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 RABGGTAQ92696 567 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 TBC1D8O95759 1140 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 LIFRP42702 1097 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 MAP7Q14244 749 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 TUBGCP2Q9BSJ2 902 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 SLC39A2Q9NP94 309 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 CDK12Q9NYV4 1490 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 SLFN14P0C7P3 912 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 ADORA1P30542 326 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 ABCD1P33897 745 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 ZNF131P52739 623 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 YARSP54577 528 aaKnown RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 LRMPQ12912 555 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 JPH2Q9BR39 696 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 WDR11Q9BZH6 1224 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 VCXQ9H320 206 aa17.96■□□□□ 0.47
ERBB2-214ENST00000583038 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-214ENST00000583038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-214ENST00000583038 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 SH3BP5O60239 455 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 KIF11P52732 1056 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 NACA2Q9H009 215 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 PPANQ9NQ55 473 aaKnown RBP17.95■□□□□ 0.46
ERBB2-214ENST00000583038 GOLGA8HP0CJ92 632 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 FNBP4Q8N3X1 1017 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-214ENST00000583038 ST7Q9NRC1 585 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 CDC23Q9UJX2 597 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 LMNB1P20700 586 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 MAN1A1P33908 653 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 PCK1P35558 622 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 KANSL2Q9H9L4 492 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 ERBB3P21860 1342 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 ATP8B1O43520 1251 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 KIF23Q02241 960 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-214ENST00000583038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
ERBB2-214ENST00000583038 CNOT6LQ96LI5 555 aaKnown RBP17.95■□□□□ 0.46
ERBB2-214ENST00000583038 ZNF408Q9H9D4 720 aa17.95■□□□□ 0.46
ERBB2-214ENST00000583038 TTLL1O95922 423 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 IFNB1P01574 187 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 TMOD1P28289 359 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 FKBP3Q00688 224 aaKnown RBP17.94■□□□□ 0.46
ERBB2-214ENST00000583038 ATP6V0A1Q93050 837 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 PALM2Q8IXS6 379 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 LINC00301Q8NCQ3 95 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 ARHGEF2Q92974 986 aaKnown RBP17.94■□□□□ 0.46
ERBB2-214ENST00000583038 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
ERBB2-214ENST00000583038 PFDN4Q9NQP4 134 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 SEPT2Q15019 361 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 PPM1KQ8N3J5 372 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 ZBTB9Q96C00 473 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 TACC3Q9Y6A5 838 aa17.94■□□□□ 0.46
ERBB2-214ENST00000583038 LMNB2Q03252 620 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms