RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PSMA5P28066 241 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 USP5P45974 858 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TDO2P48775 406 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 RBM25P49756 843 aaKnown RBP10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 KCTD2Q14681 263 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ZNF792Q3KQV3 632 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SBK1Q52WX2 424 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ADGRA1Q86SQ6 560 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 RPUSD2Q8IZ73 545 aaKnown RBP10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 HIPK3Q9H422 1215 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CNNM2Q9H8M5 875 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SIP14410 1827 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 MYADML2A6NDP7 307 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 M0R2C6 588 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 FLOT1O75955 427 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 PGK2P07205 417 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 MYOGP15173 224 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ATP2A2P16615 1042 aaKnown RBP10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 GUCY1A2P33402 732 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 HSPA4P34932 840 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 COPB2P35606 906 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 TRDNQ13061 729 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 TMEM67Q5HYA8 995 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 IFNL3Q8IZI9 196 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 MIGA1Q8NAN2 632 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ATG4CQ96DT6 458 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 IL17RAQ96F46 866 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 LSG1Q9H089 658 aaKnown RBP10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CD320Q9NPF0 282 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ANAPC4Q9UJX5 808 aa10.27□□□□□ -0.77
PDLIM1P3-201ENST00000582370 A0A1W2PRG0 241 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ZBBXA8MT70 800 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 RFXAPO00287 272 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CA3P07451 260 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 PFKMP08237 780 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SHMT1P34896 483 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 GJA9P57773 515 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 PDE4BQ07343 736 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 TMEM132BQ14DG7 1078 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SEPT2Q15019 361 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 RIOX2Q8IUF8 465 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 GJD3Q8N144 294 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 LCORLQ8N3X6 602 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 FBXL18Q96ME1 805 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 UIMC1Q96RL1 719 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SEZ6LQ9BYH1 1024 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ARMT1Q9H993 441 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SWAP70Q9UH65 585 aa10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ZHX1Q9UKY1 873 aaPredicted RBP10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 BAZ2AQ9UIF9 1905 aaKnown RBP10.26□□□□□ -0.77
PDLIM1P3-201ENST00000582370 GSG1L2A8MUP6 293 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 WDR46O15213 610 aaKnown RBP10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 FGAP02671 866 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 DYNLL1P63167 89 aaKnown RBP10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 FOXK2Q01167 660 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 NECTIN1Q15223 517 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CCDC178Q5BJE1 867 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 KRT40Q6A162 431 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 MAMDC4Q6UXC1 1216 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ZNF589Q86UQ0 364 aaPredicted RBP10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 FAM178BQ8IXR5 827 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SLC43A3Q8NBI5 491 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 KCNB2Q92953 911 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SLC9A7Q96T83 725 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SEC62Q99442 399 aaKnown RBP10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 TM6SF1Q9BZW5 370 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 KRT23Q9C075 422 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 DCP1AQ9NPI6 582 aaPredicted RBP10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 UMODL1Q5DID0 1318 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 WDR19Q8NEZ3 1342 aa10.25□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CFAP54Q96N23 3096 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CABYRO75952 493 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 SNAI1O95863 264 aaPredicted RBP10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 POLR3DP05423 398 aaPredicted RBP10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CCL23P55773 120 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 NKX3-2P78367 333 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ARNTL2Q8WYA1 636 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 TBC1D32Q96NH3 1257 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 NOC4LQ9BVI4 516 aaKnown RBP10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 WNT8AQ9H1J5 351 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 MCM9Q9NXL9 1143 aa10.24□□□□□ -0.77
PDLIM1P3-201ENST00000582370 LMCD1Q9NZU5 365 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms